Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1425 ATGTACATACTAAAATACCCTTATAATAATTATGCAAAGACAAATGTATCATTCTCCATCTCTATCTGGTCTATCCCTCGCTCTTCCTCTGCTTCTTCCCCTTCCAACAATATTCCTTCCTGGAGGTCCCTCTTGACTGGCATGGCACTTTTCCACGTCAATTCCATCAGGTTCTGCGGAATCATGCCTCCATGTTTGAAGAATCTCACTCTTATCCTTGAATTTGATATTAGTAACAATCGATTCTATCTCGATAGCAGATACAATGATTTCGAAGGGTCTTTGTCGTCACAACTATTCGAGACAGATCTGAATGCAATCTTCTTGAACAATAATCGTTTTACCGTTGCTCTCCCTATCACACTCGGTATTCTACCTAAATTGGCAGGTTTGAAGAACGTGGAAGTTATAGATATTGCTAACAATGAACTTAGTGATTATGTGTCTGATTCTATTTGTCAATCACCCTATCTATCCCTTTAG 483 0.3892 MYILKYPYNNYAKTNVSFSISIWSIPRSSSASSPSNNIPSWRSLLTGMALFHVNSIRFCGIMPPCLKNLTLILEFDISNNRFYLDSRYNDFEGSLSSQLFETDLNAIFLNNNRFTVALPITLGILPKLAGLKNVEVIDIANNELSDYVSDSICQSPYLSL* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1425 160 Gene3D Ribonuclease Inhibitor 27 160 IPR032675 -
Amo03g1425 160 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 43 123 - -
Amo03g1425 160 SUPERFAMILY L domain-like 35 158 - -
Amo03g1425 160 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 43 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1425 Amo-Chr3 36144076 36144843 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1425 35 152 Trihelix Transcription Factor Family AT1G49490 44.361 4.61e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1425 - - aip:107621173 130.183