Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1334 TCGAACTCCATTCAACTAAAACGAGCTTCTTCCTCTCTCCTTCCACGAGCTTCTTCTTCTGCCGCTGCTGCCGCCGCTTGCGTCGCGTCTCCTCATCGCACGAAAACTAGACGTCGTCCTCCTCGTGCTCCTTTTCCTACCCCTTCGCTTCATACACCTTCGCCAATTTCGCTCCCGGAGCCTCCCCCTCATCCCCACGTGCTTCTCCTCCTCCTTTGGCCACTATCGGCGTCTTTCTTCCACCTCTTCGCCACTGTGTCCAACATCGTCATCCGTGAGATTCTCCTCGGAGCAACCACCAGGCTCTCCCGGGCAACACTCCACAGCTATAAAGAGGCCCATGGTCTTGCTGCTGAAATACCTGAAGATCTATACCACTTGATCAAGAAGGTTGTCTCCATCAGGAAGCACTTGGAAAGGAATAGGAAGGACAAGGACTCCAAATTCATGTTGATTTTGGTAGAGAGCAGGATCCACCGCCTTGCACGTTACTACAAGAAGACCAAGAAGCTTCCACCTGTATGGAAATAG 531 0.5235 SNSIQLKRASSSLLPRASSSAAAAAACVASPHRTKTRRRPPRAPFPTPSLHTPSPISLPEPPPHPHVLLLLLWPLSASFFHLFATVSNIVIREILLGATTRLSRATLHSYKEAHGLAAEIPEDLYHLIKKVVSIRKHLERNRKDKDSKFMLILVESRIHRLARYYKKTKKLPPVWK* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1334 176 PANTHER RIBOSOMAL PROTEIN S15P/S13E 111 176 IPR023029 -
Amo03g1334 176 Pfam Ribosomal protein S15 110 170 IPR000589 GO:0003735|GO:0005840|GO:0006412
Amo03g1334 176 PANTHER 40S RIBOSOMAL PROTEIN S13 111 176 - -
Amo03g1334 176 Gene3D - 119 176 - -
Amo03g1334 176 SUPERFAMILY S15/NS1 RNA-binding domain 107 175 IPR009068 -
Amo03g1334 176 CDD Ribosomal_S15p_S13e 107 176 IPR000589 GO:0003735|GO:0005840|GO:0006412
Amo03g1334 176 ProSitePatterns Ribosomal protein S15 signature. 134 164 IPR000589 GO:0003735|GO:0005840|GO:0006412
Amo03g1334 176 SMART Ribosomal_S15_2 103 176 IPR000589 GO:0003735|GO:0005840|GO:0006412
Amo03g1334 176 MobiDBLite consensus disorder prediction 41 58 - -
Amo03g1334 176 MobiDBLite consensus disorder prediction 25 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1334 Amo-Chr3 31971936 31972841 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1334 112 176 Cytoplasmic Ribosomal Protein Gene Family AT4G00100 92.308 6.84e-38 125