Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1328 ATGTCTAGATGGGCTTCTGATGGTCAATCACCGGTGGGTGCTGTTGATGAATTTAATTTTGGCAAAGTGAAGCCAAGTCCTGAGATTGGTGAATTTCAAAGAGAATGTTCAGAAAGCACAATCACTAGATCCTCAGGAAGCAATGGACGAGATAATAGTGGGGGCCACTTTGATGGTAGTGATTCTGAAAAGGAATTCCCTACTGACTCCATGGTCGATGATGAGGAACAGAGTGATGTTGGTGATTATGCATGTGATTCTGATGAAGATGCCGGTTTAATGCACCRGCAGAGAAATATAAACATGCTTCAGAGTTGCAGAAGTGTGTGTGAGTTTGAAATGATTAAGAAAATCAACGAAGGAACTTATGGTGTTGTCTATAAGGCTAGGGATAAGAAGACCGGAGAAATAGTAGCATTGAAGAAGGTGAAGATGAATATAGAAAGGGATGGCTTTCCATTGTCATCCTTGAGGGAAATTAACATTCTCTTGTCTTTTGATCACCCCMCCATTGTGGATGTTAAAGAAGTAGTTGTGGATAYTTATGATGGTACTTTCATGGTGATGGAGTACATGGAGCATGACCTTAAGGGACTGATGGAGGCAAAGAAACAGCCCTTCAGTATGGGTGAAATAAAATCTTTGATGCTGCAACTTCTTGAAGGTGTCAAGTATCTCCATGACAATTGGGTTCTCCATAGGGACTTAAAGACATCAAACATTCTGCTGAACGACAAGGGGGAGCTGAAAATATGTGACTTTGGGTTGTCCCGGCAGTTTGGAAGCCCACTGAAGCCATATACTCCTATTGTTGTGACACTATGGTACAGGGCTCCAGAGCTTTTGTTAGGAGCTAAGGAATATTCAACCGCAATTGACATGTGGTCAGTGGGTTGCATAATGGCTGAGTTGGTTGCCAAGGAACCTCTGTTCACGGGTAGAACAGAACTTGAACAAATTGATAAGATTTTTAGGACCCTGGGTACACCTGATGAGAAGATTTGGCCGGGCTTATCTAAATTACCTGGTCCTAAAGCAAAATTTGTTAAACAACCGTACAATATGCTAAGGAAGAAATTTCCAGCCACATCTTTTACTGGTTTACCAGTTCTGTCTGAGCTAGGATTCGACTTGTTGAAGAAGCTTCTAACTTACAATCCAGAAGAGAGGATAAGTGCAGAAGAGGCCCTTCTTCATGATTGGTTCCATGAAGTCCCCCTTGCAAAATCTGATTTCAAGCCAATTTTCCCTCCTTTGCGTGGCCAGGCCACTTTCAGTGCGGATTAA 1287 0.4227 MSRWASDGQSPVGAVDEFNFGKVKPSPEIGEFQRECSESTITRSSGSNGRDNSGGHFDGSDSEKEFPTDSMVDDEEQSDVGDYACDSDEDAGLMHXQRNINMLQSCRSVCEFEMIKKINEGTYGVVYKARDKKTGEIVALKKVKMNIERDGFPLSSLREINILLSFDHPXIVDVKEVVVDXYDGTFMVMEYMEHDLKGLMEAKKQPFSMGEIKSLMLQLLEGVKYLHDNWVLHRDLKTSNILLNDKGELKICDFGLSRQFGSPLKPYTPIVVTLWYRAPELLLGAKEYSTAIDMWSVGCIMAELVAKEPLFTGRTELEQIDKIFRTLGTPDEKIWPGLSKLPGPKAKFVKQPYNMLRKKFPATSFTGLPVLSELGFDLLKKLLTYNPEERISAEEALLHDWFHEVPLAKSDFKPIFPPLRGQATFSAD* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1328 428 PANTHER CYCLIN-DEPENDENT KINASE 35 417 - -
Amo03g1328 428 ProSiteProfiles Protein kinase domain profile. 112 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g1328 428 Gene3D Transferase(Phosphotransferase) domain 1 194 414 - -
Amo03g1328 428 PANTHER CELL DIVISION PROTEIN KINASE 35 417 - -
Amo03g1328 428 MobiDBLite consensus disorder prediction 1 88 - -
Amo03g1328 428 SUPERFAMILY Protein kinase-like (PK-like) 106 406 IPR011009 -
Amo03g1328 428 MobiDBLite consensus disorder prediction 33 55 - -
Amo03g1328 428 CDD STKc_CDC2L1 106 402 IPR045267 GO:0004674|GO:0005524|GO:0006468
Amo03g1328 428 Pfam Protein kinase domain 112 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g1328 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Amo03g1328 428 Gene3D Phosphorylase Kinase; domain 1 94 193 - -
Amo03g1328 428 SMART serkin_6 112 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g1328 428 MobiDBLite consensus disorder prediction 68 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1328 Amo-Chr3 31729710 31733219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1328 107 407 Core Cell Cycle Gene Families AT5G10270 44.795 3.18e-84 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Amo03g1328 Pkinase 2.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1328 K08818 - gmx:100788840 662.914