Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1292 ATGGAGATAAAGGATCATCGAGAAGAGGAAAGGGAAGAAGGGAAGGTGAAAGAAGCCATGGCAGTTGACGACGAGGAAGAAAAAGAAGATGACGACGAGGAAGAAGAAGAGGGAGAGGAAGAGGAAGAGGAAGAAGGAACCACAGGTTCGAGTTTGACCATGGAGAGGGTTGCTGTAGCTAAGGAATTCATTGAAAACCATTACAAGGCTCATATGAAACATATCCAAGATCGCAAAGAAAGGCGTTTAGTACTAGAAAAGAAGCTAGCATCTTCTCATGTACCAGAAGAGGAACAAATCAATCTATTAAAAGATTTAGAGCGAAAGGAGACGGAGTATATCCGATTAAAAAGAAACAAAATATGTGTTGATGATTTTGACCTTCTAACAATTATTGGCAGAGGAGCCTTTGGCGAGGTAAGACTCTGTCGGGAGAAGAAATCAGGTCACATATACGCCATGAAAAAGTTGAAGAAGTCTGAAATGCTCCGTAGGGGACAGGTTGAGCATGTTAGAGCGGAAAGGAATGTACTTGCAGAAGTTGCAAGTGAGTGCATTGTGAAGCTGTATTACTCTTTTCAAGATGATGAATACTTATATCTAATAATGGAGTATTTACCTGGTGGTGATATAATGACTTTGCTTATGAGAGAGGAAATTTTGACCGAAACTATGGCGAGATTTTACATTGCGCAAACTGTTTTGGCAATAGAGTCTATTCATAAACACAATTACATTCATCGAGACATAAAACCTGACAACCTTCTATTGGACAAAAATGGTCATATGAAGCTCTCTGATTTTGGTCTTTGCAAGCCACTTGACTGTTCTAATTTATCATCTATAAATGAAAATGAAGTTCTAGATGATGAGAACTTGAATGATACCATGGACATTGATGGATCCAACCCAAATAAAAGAAATGGAAGGCGCTGGAAAAGTCCCCTTGAACAACTTCAACATTGGCAAATGAATCGGAGGAAGTTGGCATTTTCCATGGTTGGTACTCCGGACTATATTTCTCCCGAGGTGCTTCTAAAAAAAGGCTATGGTGCAGAATGTGACTGGTGGTCTCTTGGTGCTATATTGTATGAGATGCTTATTGGTTATCCTCCATTTTATTCTGATGATCCTATAACAACATGTAGAAAGATTGTGCATTGGAAAAATCACTTAAAATTTCCAGTTGAGATAAGGTTGAGTCCAGAAGCAAGGGATCTAATATGTAGGTTACTTGTTGATGCTCCACAAAGGCTTGGTACTAATGGAGCGTATGAAATTAAAGCTCATCCTTGGTTCAAAAATGTTGAATGGGATAGGCTTTATGAAATGGAGGCAGCATTTATACCACAGGTCGATGGAGAGCTTGACACTCAAAATTTTATGAAATTTAATGAGGTTGAAGCAGAACAACCAAAACCAACTAGAAGCGCATCAGGACCGATCAGAAAAAAATTGTTAACTCCTCAAGATCTCAGTTTTGTTGGCTATACATATAAAAATTTTGCTGCTATTAAGGGAACACGCCATTCTATTGATATGTTGTCTTTGTCAACCCCACAACGCACATCATCCATTGACTCTACACAAAGTGATTCTGCAATTGACTATTCCACATGA 1620 0.3889 MEIKDHREEEREEGKVKEAMAVDDEEEKEDDDEEEEEGEEEEEEEGTTGSSLTMERVAVAKEFIENHYKAHMKHIQDRKERRLVLEKKLASSHVPEEEQINLLKDLERKETEYIRLKRNKICVDDFDLLTIIGRGAFGEVRLCREKKSGHIYAMKKLKKSEMLRRGQVEHVRAERNVLAEVASECIVKLYYSFQDDEYLYLIMEYLPGGDIMTLLMREEILTETMARFYIAQTVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSNLSSINENEVLDDENLNDTMDIDGSNPNKRNGRRWKSPLEQLQHWQMNRRKLAFSMVGTPDYISPEVLLKKGYGAECDWWSLGAILYEMLIGYPPFYSDDPITTCRKIVHWKNHLKFPVEIRLSPEARDLICRLLVDAPQRLGTNGAYEIKAHPWFKNVEWDRLYEMEAAFIPQVDGELDTQNFMKFNEVEAEQPKPTRSASGPIRKKLLTPQDLSFVGYTYKNFAAIKGTRHSIDMLSLSTPQRTSSIDSTQSDSAIDYST* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1292 539 Gene3D Phosphorylase Kinase; domain 1 117 211 - -
Amo03g1292 539 ProSiteProfiles AGC-kinase C-terminal domain profile. 434 509 IPR000961 GO:0004674|GO:0005524|GO:0006468
Amo03g1292 539 MobiDBLite consensus disorder prediction 1 22 - -
Amo03g1292 539 SUPERFAMILY Protein kinase-like (PK-like) 123 479 IPR011009 -
Amo03g1292 539 Gene3D Transferase(Phosphotransferase) domain 1 212 450 - -
Amo03g1292 539 SMART serkin_6 126 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g1292 539 ProSiteProfiles Protein kinase domain profile. 126 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g1292 539 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 45 538 - -
Amo03g1292 539 SMART pkinase_C_6 434 501 IPR000961 GO:0004674|GO:0005524|GO:0006468
Amo03g1292 539 MobiDBLite consensus disorder prediction 23 48 - -
Amo03g1292 539 ProSitePatterns Protein kinases ATP-binding region signature. 132 155 IPR017441 GO:0005524
Amo03g1292 539 MobiDBLite consensus disorder prediction 519 539 - -
Amo03g1292 539 CDD STKc_NDR_like 124 500 - -
Amo03g1292 539 Coils Coil 22 42 - -
Amo03g1292 539 PANTHER SERINE/THREONINE-PROTEIN KINASE 45 538 - -
Amo03g1292 539 Pfam Protein kinase domain 324 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g1292 539 Pfam Protein kinase domain 128 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g1292 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Amo03g1292 539 MobiDBLite consensus disorder prediction 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1292 Amo-Chr3 30222486 30236796 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1292 37 538 AGC Kinase Gene Family AT2G19400 73.214 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Amo03g1292 Pkinase 7.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1292 K08790 - gmx:100802177 828.935