Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1290 ATGGAGGAAATTACTTCGACGATTGCGGTGCCATACAGACTTGGGAATTTGATTCAGAAGGAGTCAACGGTGGCAACCCGCATGGAGATAACTGGTCTGAAGCTCATGGCAAACACAACAGCTTTGATATTAAATCCTACAATTGAAAGTCATCATCAATCTTACTCTGTTGGAAACGAAGACTACTGCACAGATATATGTCCAAAACACCAAACTAGGTCATCTGCAGAGGTAAAGGAGAATCAGGGTCGAACCAACTCAGCTCCCCTTGAATCAGAAATGGTTACTGAATTTAAGGTGAAAGATGAATTCATGTCAGCTAACAGTTTTCATTCTGTACATAATCAAAGATCTGAATCTGTTGCCAGTGACAAAAGTTGTCCTGGGAATGAAGCTGCTACTTTGACTGATAATTGTTCTGATTCTGATAATGATTTGCTAATTGCCACCAAGTTTAATAGTAATATCCAAGGAAAGTCCAGTTCGATCGAGGCGAGTGCAGAGCTGGAGCCAATGCAGAACATGGTTTCTGCTGCTATGGAACTTGAAACTGAAGATGGAAGCGGATCAGATGGATTTGATCCAAAACTATCTGCCAGTCTCCATGATGTGTCAGACAAGCAAACAAGCATAGCAGACTTCCAGAATGCATCGGAATCTGATGGAGGTCCTCGTTGGGGTTTCTCATCAGTTTGTGGAAGGAGACAAGAGATGGAAGATGCTGTTGCTTGTCAGCCTCAACTTCTTCAAGTTCCTTCACAGATGCTAGCAGATGACCACGTTAATGAAAATGGAAACTCATCAGCCCACTTTTTCGGTGTCTATGATGGACATGGGGGTTGTCAGGTTGCGAATTACTGCCGGGAACATCTTCATTCAGTGTTGACTGAGGAGATAGAAGCTGCAAAATCTAGTTTAAACAATGCCAGGGAGAAGTGGCAAGAACATTGGAAGAAAGCATTCTCTAATTGTTTTCATAAAGTAGATGATGCAGTTGGACGAATCGGGGCACCGGATAGTGAAAGCCATTGTGATGGATCTGAGGGTAGTATTGAACCCCTTACTCCTGAGACTGCAGGCTCTACTGCAGTGGTTGCTATTCTAACTCAAACCTACATTATAGTCGCAAATTGTGGTGATTCAAGAGCAGTTCTATGTCGCGGAAAAGAAGCCATGCCTTTGTCTACTGACCACAAACCTAATAGAGAAGATGAATGGGAAAGGATAGAAGCTGCTGGAGGAAGGGTCATACAGTGGAATGGTTACCGAGTTCTTGGTGTTTTGGCAGTGTCAAGATCCATAGGTGATAGGTACTTGAAACCATGGATAATTCCAGAACCAGAAGTCATGTTTATTCGAAGACAGAAAACCGACGAGTGCCTTATTCTCGCCAGTGACGGTCTATGGGATGTCATCACAAACGAAGAAGCCTGCGCCATTGCGCGAAAACGAATCCTCCTTTGGCATAAGAAGAATGGCAGCAACAACAACAACAATATCAGTGTATCAACAGAACATGGCCATGGCATTGATCCTGCAGCTCATTATGCTGCAGAATGTCTATCTAAACTCGCCATCCAAAGGGGAAGCAAAGATAATGTCTCAGTCATTGTTATAGACCTAAAGGCCCAAAGAAAATTGAAGAAGAAAGCATAG 1656 0.4318 MEEITSTIAVPYRLGNLIQKESTVATRMEITGLKLMANTTALILNPTIESHHQSYSVGNEDYCTDICPKHQTRSSAEVKENQGRTNSAPLESEMVTEFKVKDEFMSANSFHSVHNQRSESVASDKSCPGNEAATLTDNCSDSDNDLLIATKFNSNIQGKSSSIEASAELEPMQNMVSAAMELETEDGSGSDGFDPKLSASLHDVSDKQTSIADFQNASESDGGPRWGFSSVCGRRQEMEDAVACQPQLLQVPSQMLADDHVNENGNSSAHFFGVYDGHGGCQVANYCREHLHSVLTEEIEAAKSSLNNAREKWQEHWKKAFSNCFHKVDDAVGRIGAPDSESHCDGSEGSIEPLTPETAGSTAVVAILTQTYIIVANCGDSRAVLCRGKEAMPLSTDHKPNREDEWERIEAAGGRVIQWNGYRVLGVLAVSRSIGDRYLKPWIIPEPEVMFIRRQKTDECLILASDGLWDVITNEEACAIARKRILLWHKKNGSNNNNNISVSTEHGHGIDPAAHYAAECLSKLAIQRGSKDNVSVIVIDLKAQRKLKKKA* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1290 551 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 143 550 - -
Amo03g1290 551 CDD PP2Cc 225 541 IPR001932 -
Amo03g1290 551 SMART PP2C_4 215 539 IPR001932 -
Amo03g1290 551 Pfam Protein phosphatase 2C 227 534 IPR001932 -
Amo03g1290 551 ProSiteProfiles PPM-type phosphatase domain profile. 225 541 IPR001932 -
Amo03g1290 551 ProSitePatterns PPM-type phosphatase domain signature. 271 279 IPR000222 GO:0043169
Amo03g1290 551 PANTHER ALPHABET, ISOFORM E-RELATED 143 550 - -
Amo03g1290 551 Coils Coil 292 312 - -
Amo03g1290 551 Gene3D - 214 551 IPR036457 -
Amo03g1290 551 SUPERFAMILY PP2C-like 224 542 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1290 Amo-Chr3 30042674 30046392 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1290 224 550 PP2C-type Phosphatase Gene Family AT4G26080 59.633 1.45e-134 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1290 K14497 - gmx:100812974 578.17