Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo03g1251 | TTACACTCTAGAAAAATGGCATCATCAAGCTCTTACAACTCTCCATGTGCTGCTTGCAAATTCTTGAGGAGGAAGTGTTTGCCAGGATGCATCTTTGCACCTTACTTCCCACCTGAAGAACCCCAAAAATTCGCSAATGTTCACAAGATCTTCGGCGCGAGCAATGTCACCAAGCTTCTCAARGAGCTTCTGCCTCAGCAGAGGGAAGACGCAGTGAATTCCCTCGCYTACGAGGCAGAAGCTCGTGTGAGAGACCCTGTTTACGGCTGCGTTGGCGCCATKTCTTACCTTCAGAGACAAGTCCAGAGACTTCAGAAGGAACTTGATGCTGCCAACGCGGATCTTCTTCGCTACGCTTGCAACGAAATRCCTCCTCCACARCATCATGTCCCAACCRTYGCACCACCATTAACTCCCACAATTCATCATCAACTRACACAAAGGCACTTTGGTGGTGCAAGAATTGGCAATGATCATGGAATTGGATTTTATAGGCAATCTCCAACCACRTATTCCTTCCCTTATTCTCTTCCATGGAATGAGGACATCAATGGTGGAGGAGCAGAAGGAGGAGGTAATTTATGA | 585 | 0.465 | LHSRKMASSSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLKELLPQQREDAVNSLAYEAEARVRDPVYGCVGAXSYLQRQVQRLQKELDAANADLLRYACNEXPPPQHHVPTXAPPLTPTIHHQLTQRHFGGARIGNDHGIGFYRQSPTTYSFPYSLPWNEDINGGGAEGGGNL* | 195 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo03g1251 | 194 | PANTHER | ELONGATED PETIOLULE 1 | 6 | 190 | - | - | |
Amo03g1251 | 194 | ProSiteProfiles | LOB domain profile. | 14 | 115 | IPR004883 | - | |
Amo03g1251 | 194 | Coils | Coil | 95 | 121 | - | - | |
Amo03g1251 | 194 | Pfam | Lateral organ boundaries (LOB) domain | 15 | 112 | IPR004883 | - | |
Amo03g1251 | 194 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 6 | 190 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo03g1251 | Amo-Chr3 | 28762915 | 28765360 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo03g1251 | 6 | 194 | AS2 family | AT5G63090 | 61.881 | 8.44e-72 | 214 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Amo03g1251 | LOB | 2.7e-41 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo03g1251 | - | - | gmx:100799774 | 275.789 |