Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1229 ATGGCAACTGCCATTTGCAGTGCCATTATATTGGCAAAACTTTCGGTGATTCCTGTGAGGAGAGGTTATTGGGGTAACAAGATTGGAAAGCCACACACCGTTCTCTGCAAGGTCACCGAAAATTGTGGTTCCGTCACTGTCCGTATGGTGCCTGCTCCTCGTGGTTTTAGAATTGTTGCTGTTAGGGTTCCAAGAAGGTCTTGCAATTTGCAGGGATTGATGATGTATTTACTTCTTCTAGAGGATCCACCATTTCTTTGGAAATTTCACACTGATCTACTTGCCAAGCCAACAGCCAAGGCTCTCTCATCTTGGAGGATGAAAGGGTCGAGCTTAATCTTTACCATTTCTTGGCATTTATGTTCACCATTTTTTTCAATAAATCAACAGACTGCGTGCACCCAATTTCAAATTAATTAA 420 0.4238 MATAICSAIILAKLSVIPVRRGYWGNKIGKPHTVLCKVTENCGSVTVRMVPAPRGFRIVAVRVPRRSCNLQGLMMYLLLLEDPPFLWKFHTDLLAKPTAKALSSWRMKGSSLIFTISWHLCSPFFSINQQTACTQFQIN* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1229 139 PANTHER RIBOSOMAL S SUBUNIT 2 72 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Amo03g1229 139 Pfam Ribosomal protein S5, C-terminal domain 41 72 IPR005324 GO:0003735|GO:0005840|GO:0006412
Amo03g1229 139 Gene3D - 19 78 IPR014721 -
Amo03g1229 139 SUPERFAMILY Ribosomal protein S5 domain 2-like 32 73 IPR020568 -
Amo03g1229 139 PANTHER - 2 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1229 Amo-Chr3 28566103 28567115 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1229 1 73 Cytoplasmic Ribosomal Protein Gene Family AT1G58983 75.342 1.45e-32 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1229 K02981 - gmx:100797105 114.39