Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1191 ATGAGTCTCATCAAGTGCAAGTCTTGCAAGCTTCGATGGTGCAACCAGCTCTCCCCACCCGTGGAGCATTGGGCCTTCACCCCCGAAGAGGACGACACCATAATCAGAGCTCACGCTCGGTTCGGCAACAAGTGGGCCACCATAGCCCGACTCCTTTTTGGCAGAACCGATAATGCCATTAAGAACCACTGGAACTCCACCCTCAAATGCAAGTACGCCTCCATGGGCCCCATCGACGATCCTTACTTCGCACAGCCACTCAAATGCTTCGTCAGCACCAGCGCCGCCGTACCCGTGTCAACGGTGGTGGTGAGGTACTCGTTGCCGACGGTGATGGCGACGACGGAGGTGGCGGGCCGTGGCCCAACTCATCCATGCCATTCACGACTTTTAGTCCCCTGTTTTTTATTTTCTTCTCGCTCCTTTTCATAA 432 0.5532 MSLIKCKSCKLRWCNQLSPPVEHWAFTPEEDDTIIRAHARFGNKWATIARLLFGRTDNAIKNHWNSTLKCKYASMGPIDDPYFAQPLKCFVSTSAAVPVSTVVVRYSLPTVMATTEVAGRGPTHPCHSRLLVPCFLFSSRSFS* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1191 143 ProSiteProfiles Myb-like domain profile. 18 68 IPR001005 -
Amo03g1191 143 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 72 IPR017930 -
Amo03g1191 143 PANTHER TRANSCRIPTION FACTOR MYB73 6 96 - -
Amo03g1191 143 CDD SANT 25 68 IPR001005 -
Amo03g1191 143 SMART sant 22 70 IPR001005 -
Amo03g1191 143 Pfam Myb-like DNA-binding domain 25 67 IPR001005 -
Amo03g1191 143 SUPERFAMILY Homeodomain-like 7 73 IPR009057 -
Amo03g1191 143 Gene3D - 24 80 - -
Amo03g1191 143 PANTHER MYB PROTEIN-RELATED 6 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1191 Amo-Chr3 27692029 27693228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1191 7 97 MYB Transcription Factor Family AT4G37260 63.366 5.50e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo03g1191 Myb_DNA-binding 5.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1191 K09422 - aip:107615096 220.705