Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1183 ATGCAGATTCAACTTTGTGATATTTGTTGTGATGTCAGTTTTTTTGAGAGATTCAGTTTTTCAAGCCAAATGGATTTCGACCTTTACTCAAGCGATAATGATGAAGAGTCATCTGAGATGTCGTTGGGTGTATGTGGTTCTTCAGGGTCCTCTGATGATGATGATAGTACTAGCTTATTTGGCATGGGAACCAGTCACTCGGAATCGAACAAAGAATCGCATCGTTCACAGGGGGACTTCTTACGTACAGTTTTCACTTCTGAGGAGGAGGCTTACAATGCTTACAAGGGGTTTGCCTGGACAAGGGGTTTTGGTGTTTGCAAGGGGGATGTGGGACGGGTTGATGGTGTTTTGGTGAGGCGGGACATCTTCTGTCATCGTCAGGGCACGAGGAGTGACAAGCATTATGATCGGCCAGAACGAGTAAGGGAGGAGCGGCTAGAGAGTCGCACGAACTGCAAAGCAAAATTAAAAATATACTATGATGTCCATGATAATGTGTGGAGAGTGCGAAAGATTATTGATGAACACAACCACAACATGGCCCCGACCGCAGTTTGCAACCTGTTGCCA 573 0.4555 MQIQLCDICCDVSFFERFSFSSQMDFDLYSSDNDEESSEMSLGVCGSSGSSDDDDSTSLFGMGTSHSESNKESHRSQGDFLRTVFTSEEEAYNAYKGFAWTRGFGVCKGDVGRVDGVLVRRDIFCHRQGTRSDKHYDRPERVREERLESRTNCKAKLKIYYDVHDNVWRVRKIIDEHNHNMAPTAVCNLLP 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1183 191 MobiDBLite consensus disorder prediction 37 67 - -
Amo03g1183 191 MobiDBLite consensus disorder prediction 37 75 - -
Amo03g1183 191 Pfam FAR1 DNA-binding domain 95 182 IPR004330 -
Amo03g1183 191 PANTHER PROTEIN FAR1-RELATED SEQUENCE 11 64 181 - -
Amo03g1183 191 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 64 181 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1183 Amo-Chr3 27467589 27468481 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo03g1183 FAR1 5e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1183 - - adu:107478967 298.13