Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1173 ATGGGGGTGGGGGTAGTTTCGTCATTGATTCTTCAGCTGGTGAAGCTCTTCATCATTGGCTCTGTTGTGACACTGCAAGGATCCAAAGGGTCTGTTATATCCCCATCTCCGGCATTCGCTCCGGTCATTCATCCCAGAGGAGAAACACTTGGGCCTATCCATCATGGACACTGGAGAAGCAATGCACCGAGCTCCCCAGTGGATCCAGATGGGTTTCTCCTATCCCCAAATCCAGCATCTTTGCCCATGAATCCTTCACCTAGAACCATTTCTCCGAGCTCTCCAGAAGTATCAAATGGGTCGTTCTTGCCTACTCCAGTTTCATCTCCTATTCCTCCTCATAAGATTAAGGGAATTGAACCATCCATATCTCCCAGTAGTAGTCCAACCACCATAACATTATCACCACCGAACGAGGCTGCGCCTATATCGGCAACTGGTCAAGGGAATGCACCACCACTGCAATCAATACAACCAAGTCCACCTCAAAGGAAAGCACCTCCTATTAGGCCTCCTGAATCATCTCCAATTTCTAGAGCTCAACCTCCAAATAATTCACCAGCGAGCCAACCAATCGAACACGGAAGTTTTCCCCCTGTGGTTGAGAATAGGAATGCTAGCAAGAGTCACACCCCGAACCCAATTTCACCAGCTCCAACTGCAGTACCATCTACCAACTTGCCTACATCTTCACCAGTAAGTCAACCAGTTGAAAATGGCAGTTTCCCCCCTAATATTCACACAGAGGGTGCAAAGAAGGGTCATTCACTGAAACCGGTTGCACCGGCTCCTCTTCCAGTCATTTTGCCTAAAATTTCACCGAGTCAGCCACCTGAACATGAAAGCTTGCCTCCAACTATTAACAAGAGTAATTCCAGTGAGAGTCACAAACAGGATCCAGTTTCACAAGCTCCAGTTGCATTATCTCCTGCAACTTTGCCAGAAAATTCACCCAACGTTCATAACAGAACTGTAAATAAGGGTCTTGCTCACACTCCAACCGCAGAGCCAGCATCACCAAATTCTTTTGCATCCCCGCCATCAAAAATGGAAAATTACCAACCAGTAGGCCGTCCTGTTCTTCCAAAAGTAACTCCATCTATATCTCCTGCACAAGTTACACCACCAAAAAGTGCATATCCAATAAATCCACCACCTTTCCACCCCGTTATACCAGCAGCATCTCCATCAAAATTACCAGCACCTGTTGTCTCTCCCACACTAACACCTTCCAGAAAATCTGATTGGAAAAGTAACGGCAAACCAGTTTCAGCACCTTTGTACAAAGCACCAAAGCCATTACCAGCTATAGTACATTCCCCTGTTCAAGTCCCAGTTGCATCACCTCCTGTGAATTTGCCCGAAAATTCACCAGTTCGCCAACCTATTCATCAAGGAAGTTTAGCTCCTGTTGTTCATAACAAAACTGAAAATAAGGGTCATATTCACACTCAAGAGCCAGCATCACCAAATTTTCTTGCATCCCCACCATGGAAAATGGAAAATAACCAATCAGTTGGCGGTCTTGTTTTTCCAGAAATAACTCCTTCCATATCACCTGCACAAGTTGCACCACCACCTTTCCACCCAGTTTCACCACCAACAGTATCTCCATCAAAATTGCCAGTACCTGTTGTTGTCTCTCCGGCAGTACCTGTTGCTGTCTCTCCGGCACTAACTCCTTCCAGAAGCTTCGATTGGAAACGAAGGGGAGAACCAGTTTCGGCACCATTGTACAAAGCACCTATGCCGCTGCCAGCTGTAGTACATTCCCCTGTTCAAGCCCATGCAGTACATAATTCAAGGCAGTTTCATCATGCTCCTGCCCCTCCGGTGTCTCCTCCTAAATCTGCATCAGAAAAAGAATATCATTCTCCTGCATCTTCACCATTAACCACATCTTATAAACATCACTCTAGGAGTATAGCCACCAGCCCTGCTCCTACATTATCATATTCGGTTTCCCCTCCAACTTCAGAACACCAAGATCACCAAATTCCTCCACCACTGTCGACAACGGGACGAACACATCATGCTTCGCCACCAGCAAACACAGGTTCTACACTTTCCTCACCAGCCAGCCAGGTTTCTCCGGCTCCTTCTCCATGGTTCATAATATCTCCTCACCCAACCAAAATTCTATTTCATCCTCCTAAAGTATCTCCTTCGCGGTCTCCTGCGGAGAGTCCTAAGAAGCCAGTCCTGCCTCAAATTCACACACTGCCTCCACCACCTCCTAATGAAGATTGTTTATCAACTATTTGTTCAGAGCCCTACACAAATTCTCCACCTGGAGCACCATGCAGATGTGTCCTTCCCATGAAAGTTGGTCTTCGCCTTGATGTTTCTCTGTATACCTTCTTCCCTTTGGTTTCAGAGCTTGCTTCCGAGATTGCTGCAGGGGTTTTCATGACACAAAGTCAAGTTCGAATTATGGGAGCCGAAGCGGCAAGCCAAGATCCAGATAAAACTGATGCTCTCATTTTCTTGGTACCCATTGGGGAAGGCTTTGATCACACTACTGCCTTACTGAACTCTCAGAGATTTTGGCAGAAGAAGGTTGCAATAAAATCTTCTTACTTTGGTAGCTATGAAGTCTTGTATGTTAGCTATCCAGGTTTACCACCACCTCCTCCTCTACCACCTTCAAGCATTTCGTCGATATACGGTGGTCCATATTCAAATAATGGTAACAATGGAAGAATGATAAAGCCCCTTGGGGTGGACATACAGAAGAGGCATCACAAAGATGGACTTAGTAGGGGCATCATTGCTATTATTGCTCTCTCGGTTTTTCTTGCTCTTGTTTTATTATTGGCTGCTGGTTGGGCCTTGTTCAAGTATAGACATCATGTAAGCCAGCCAACATCAACCCCGCGTGTTTCGCCACGTTCTGTTACCAAAACACAAGGAACTACTGAATCATTAGCAGCTGGGGGAATTGCTTCGGCCTCATCATCATTTCGATCTAGCATTGCTGCTTATAAAGGATCTGCTAAGACTTTCAGTGCGAACGACATTGAGAAAGCCAGCAATAACTTTAACGATTCAAGGATACTTGGAGAAGGTGGTTTTGGTCGGGTTTATAGTGGTATTTTTGAAGATGGGACAAAAGCAGCAATCAAGGTTCTCAAAAGGGAGGATCATCATGGTGACCGTGAATTCTTAGCTGAAGTTGAGATGCTTAGCCGCCTTCACCACAGAAATTTGGTTAAGCTTATTGGTATATGCACCGAGGTTAGCTTCCGCTGCCTCGTCTATGAACTCATCCCAAATGGCAGCGTGGAATCCCATTTACATGGTGTTGACAGGGAAAACAGTCCACTTGATTGGAGTGCTAGGATTAAGATCGCTCTCGGTGCTGCACGCGGTCTGGCTTATCTGCATGAAGATTCAAGCCCCCCTGTCATACACAGGGACTTCAAGTCTAGTAATATCTTGTTGGAAGATGATTTTACACCAAAAGTATCTGATTTTGGATTAGCTAGAATTGCAGCCGACGAAGAGAACAGACACATATCAACTCGTGTCATGGGAACTTTTGGATATGTGGCTCCGGAGTATGCAATGACTGGCCATCTTCTTGTGAAGAGCGATGTGTACAGCTATGGTGTTGTTCTTCTTGAGCTTCTAACAGGAAGAAAACCAGTAGATATGTCGCAAGCACCCGGTCAAGAGAATCTCGTTGCATGGGCTCGTCCCTTGCTCACAAGTAAAGAAGGATTGGAAGCGATAATAGACCCGTCTCTAGGGACTGATGTGCCTTGGGATAGTGTGGCCAAAGTTGCAGCTATTGCTTCAATGTGTGTTCAACCAGAGGTATCGGACCGTCCTTTCATGGGTGAAGTTGTTCAGGCTCTAAAACTTGTGAGTAATGAATGTGATGAGGCAAAAGAAGCAGGTACAAGAAATTCTAGCCAGGAGGATTTATCTCTTGATTTGGATAATGTTTCTAGTCAACTACCAGATCATTTCCAATTCCAACGTCAATTCTCTGCCGCCAACTATACTTCTGGAAGTGATATCGAAAAAGGTTTGTCATCATTTGAGATATTCAGCTCCTCAGCAAGATTTGGAAGGCAAGATTCGGGATCTTTTCGACGTCACTCCTATTCGGCTCCTTTGAGAACCGGAAGAAAGCAGCAGTTGTGGCAGGTTATTAGCCGGCTTTCTGGTAGTGTAAGTGAACACAGAACCATCTCCAAGTTATGA 4212 0.4558 MGVGVVSSLILQLVKLFIIGSVVTLQGSKGSVISPSPAFAPVIHPRGETLGPIHHGHWRSNAPSSPVDPDGFLLSPNPASLPMNPSPRTISPSSPEVSNGSFLPTPVSSPIPPHKIKGIEPSISPSSSPTTITLSPPNEAAPISATGQGNAPPLQSIQPSPPQRKAPPIRPPESSPISRAQPPNNSPASQPIEHGSFPPVVENRNASKSHTPNPISPAPTAVPSTNLPTSSPVSQPVENGSFPPNIHTEGAKKGHSLKPVAPAPLPVILPKISPSQPPEHESLPPTINKSNSSESHKQDPVSQAPVALSPATLPENSPNVHNRTVNKGLAHTPTAEPASPNSFASPPSKMENYQPVGRPVLPKVTPSISPAQVTPPKSAYPINPPPFHPVIPAASPSKLPAPVVSPTLTPSRKSDWKSNGKPVSAPLYKAPKPLPAIVHSPVQVPVASPPVNLPENSPVRQPIHQGSLAPVVHNKTENKGHIHTQEPASPNFLASPPWKMENNQSVGGLVFPEITPSISPAQVAPPPFHPVSPPTVSPSKLPVPVVVSPAVPVAVSPALTPSRSFDWKRRGEPVSAPLYKAPMPLPAVVHSPVQAHAVHNSRQFHHAPAPPVSPPKSASEKEYHSPASSPLTTSYKHHSRSIATSPAPTLSYSVSPPTSEHQDHQIPPPLSTTGRTHHASPPANTGSTLSSPASQVSPAPSPWFIISPHPTKILFHPPKVSPSRSPAESPKKPVLPQIHTLPPPPPNEDCLSTICSEPYTNSPPGAPCRCVLPMKVGLRLDVSLYTFFPLVSELASEIAAGVFMTQSQVRIMGAEAASQDPDKTDALIFLVPIGEGFDHTTALLNSQRFWQKKVAIKSSYFGSYEVLYVSYPGLPPPPPLPPSSISSIYGGPYSNNGNNGRMIKPLGVDIQKRHHKDGLSRGIIAIIALSVFLALVLLLAAGWALFKYRHHVSQPTSTPRVSPRSVTKTQGTTESLAAGGIASASSSFRSSIAAYKGSAKTFSANDIEKASNNFNDSRILGEGGFGRVYSGIFEDGTKAAIKVLKREDHHGDREFLAEVEMLSRLHHRNLVKLIGICTEVSFRCLVYELIPNGSVESHLHGVDRENSPLDWSARIKIALGAARGLAYLHEDSSPPVIHRDFKSSNILLEDDFTPKVSDFGLARIAADEENRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQAPGQENLVAWARPLLTSKEGLEAIIDPSLGTDVPWDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVSNECDEAKEAGTRNSSQEDLSLDLDNVSSQLPDHFQFQRQFSAANYTSGSDIEKGLSSFEIFSSSARFGRQDSGSFRRHSYSAPLRTGRKQQLWQVISRLSGSVSEHRTISKL* 1404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1173 1403 MobiDBLite consensus disorder prediction 155 178 - -
Amo03g1173 1403 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 570 1402 - -
Amo03g1173 1403 MobiDBLite consensus disorder prediction 622 696 - -
Amo03g1173 1403 MobiDBLite consensus disorder prediction 402 418 - -
Amo03g1173 1403 Gene3D Phosphorylase Kinase; domain 1 986 1089 - -
Amo03g1173 1403 MobiDBLite consensus disorder prediction 954 973 - -
Amo03g1173 1403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1136 1148 IPR008271 GO:0004672|GO:0006468
Amo03g1173 1403 MobiDBLite consensus disorder prediction 601 696 - -
Amo03g1173 1403 ProSiteProfiles Protein kinase domain profile. 1014 1290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g1173 1403 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 9 75 - -
Amo03g1173 1403 SUPERFAMILY Protein kinase-like (PK-like) 995 1288 IPR011009 -
Amo03g1173 1403 Pfam Protein tyrosine and serine/threonine kinase 1018 1287 IPR001245 GO:0004672|GO:0006468
Amo03g1173 1403 ProSitePatterns Protein kinases ATP-binding region signature. 1020 1042 IPR017441 GO:0005524
Amo03g1173 1403 CDD STKc_IRAK 1020 1288 - -
Amo03g1173 1403 MobiDBLite consensus disorder prediction 377 396 - -
Amo03g1173 1403 MobiDBLite consensus disorder prediction 222 242 - -
Amo03g1173 1403 MobiDBLite consensus disorder prediction 263 281 - -
Amo03g1173 1403 MobiDBLite consensus disorder prediction 51 429 - -
Amo03g1173 1403 PANTHER OS01G0750732 PROTEIN 570 1402 - -
Amo03g1173 1403 MobiDBLite consensus disorder prediction 121 154 - -
Amo03g1173 1403 MobiDBLite consensus disorder prediction 90 105 - -
Amo03g1173 1403 MobiDBLite consensus disorder prediction 282 302 - -
Amo03g1173 1403 MobiDBLite consensus disorder prediction 717 743 - -
Amo03g1173 1403 Gene3D Transferase(Phosphotransferase) domain 1 1090 1313 - -
Amo03g1173 1403 MobiDBLite consensus disorder prediction 309 349 - -
Amo03g1173 1403 PANTHER OS01G0750732 PROTEIN 9 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1173 Amo-Chr3 27119297 27128404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1173 510 1399 Receptor kinase-like Gene Family AT5G56890 54.516 0.0 821
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Amo03g1173 PK_Tyr_Ser-Thr 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1173 - - ccaj:109805519 1513.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2567 13 48047253 48056410 Amo03g1173 03 27119297 27128404 hybridization