Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1136 ATGGTGTTGTTGCAGGTTCTGAGGCTGGCGGTGGTGATAGTAAGGAACAGGAAGGACTCCCAGAGTTATGTGGGAATGAAGAGAAAGACATGTGCTGAATTAGGGATTAAGTCCTTCGACATTGACCTTCCTGAACAAGCTTGTAAATTGAAATTAGGCGATCTCAAAGGAGCATTGTTGGATACCGAATTTGCAGTGCGTGATGGAGAGAATAATGCCAAAGCTTTGTTCTGCCAAGATCAGGCATACATGGCACTCCATGACATTGATGCTGCCGTTGAAAGCTTTAAGAAGGCATTGGCCTTGGAGCCAAACGATGGTAATTTACGATTTTGGATCATGCCTTTGGCATAA 354 0.4435 MVLLQVLRLAVVIVRNRKDSQSYVGMKRKTCAELGIKSFDIDLPEQACKLKLGDLKGALLDTEFAVRDGENNAKALFCQDQAYMALHDIDAAVESFKKALALEPNDGNLRFWIMPLA* 118
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1136 117 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP40 42 110 - -
Amo03g1136 117 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 42 110 - -
Amo03g1136 117 Gene3D Tetratricopeptide repeat domain 17 116 IPR011990 GO:0005515
Amo03g1136 117 Pfam Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 8 48 IPR020630 GO:0004488
Amo03g1136 117 ProSiteProfiles TPR repeat profile. 73 106 IPR019734 GO:0005515
Amo03g1136 117 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 8 52 IPR046346 -
Amo03g1136 117 SUPERFAMILY TPR-like 47 113 IPR011990 GO:0005515
Amo03g1136 117 SMART tpr_5 73 106 IPR019734 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo03g1136 Amo-Chr3 25875447 25876330 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1136 42 111 Calmodulin-binding Proteins AT3G25230 40.000 6.71e-08 47.8