Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1128 ATGGTTGTCACCGTGAGCAGTGTCACCGCCGACATGGTTATAAGCCATGAGAGAACCGATGATGATTCCAAGGGTTCCAAAAACAAGAAGAGCGACAGCGAATTTCTAGCTATCCCAGCTGATCTAGACAAGCAAGCAAAGGAGGATGTTATGATGAGATTGGAGGAAACTCCAGCGAACATGAGTGGTTGTTCTTCACTACAGCCAAGCCCGCAGTCATCGGCGCTCCCAAACCCTGTTCCTTCCTACCATGCTAGCCCAACTTCCTCATCATTCCCCAGCCCCTCTCGCATTGATCCCAACATTCAAAATCCCTCTTCATTCCTCCTACCATTCATTTATAACATCACCTCCATCCCCACAAACCTTCCTCCTCTTAGAATATCCAATAGTGCCCCTGTTACCCTTTCTCTTTCTTCCCTAACCTCCAGGGGTTCTAAAAGGAAGGCGGATTTCGAATCCCTCTTCAATGTCTCCTCTCTTAATTCATTCCGCCATCCTCTCTTCACAGTATTCGTCCCATCTAACCCCTCCCGCCGCCACCAATTGGCTACTTCCACCATTCTCAATTTTCAGACAACGACTGCCTCGGCTGCTCCTCCATCGCCTACCTTTAACCTTGGAAAATCAGCAATGCAGCAGATCACTCCCCAAGATTCCATGGATATGAATGAAGGCATGCAATGGGGCCAGGCTGGAGAGAGAGGAAGACCATCGGATTTTGACTTTGAGAATGGTAGAGTGAAGCCATGGGAGGGTGAGAGGATACATGAGGTGGGAGTGGATGAGTTAGAACTTACTCTAGGCTGTGGAAAACAATGTTTAGGGCTACCTATATGGACCACAAACCGCCAGCTCAGCGCTCCGGCTACTGAGTCACGTCGGAAATGGGTGGAAGAACCAAGATTTCGCACGGAGCTCAATGTGAAAGTTAGGGGTAACATTGGTGCACGGGCTCAATCTGAGGGACCATTTTGGGAATTTACTCCTTTTTGA 996 0.488 MVVTVSSVTADMVISHERTDDDSKGSKNKKSDSEFLAIPADLDKQAKEDVMMRLEETPANMSGCSSLQPSPQSSALPNPVPSYHASPTSSSFPSPSRIDPNIQNPSSFLLPFIYNITSIPTNLPPLRISNSAPVTLSLSSLTSRGSKRKADFESLFNVSSLNSFRHPLFTVFVPSNPSRRHQLATSTILNFQTTTASAAPPSPTFNLGKSAMQQITPQDSMDMNEGMQWGQAGERGRPSDFDFENGRVKPWEGERIHEVGVDELELTLGCGKQCLGLPIWTTNRQLSAPATESRRKWVEEPRFRTELNVKVRGNIGARAQSEGPFWEFTPF* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1128 331 MobiDBLite consensus disorder prediction 59 98 - -
Amo03g1128 331 MobiDBLite consensus disorder prediction 14 54 - -
Amo03g1128 331 PANTHER BES1/BZR1 HOMOLOG PROTEIN 1 51 273 - -
Amo03g1128 331 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 51 273 IPR033264 GO:0003700|GO:0006351|GO:0009742
Amo03g1128 331 MobiDBLite consensus disorder prediction 1 98 - -
Amo03g1128 331 Pfam BES1/BZR1 plant transcription factor, N-terminal 53 100 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1128 Amo-Chr3 25633465 25635894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1128 65 272 BZR Transcription Factor Family AT1G75080 45.148 1.80e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Amo03g1128 BES1_N 2.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1128 K14503 - pop:7478010 244.202