Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1110 ATGCCTCTTTTCTATGAAGTTCTTTCAGGTGTTATACTGAAGAAGGAAGACGAGCAAGAAAGAAGAAACAAGAGTGCCACAGTTACAAACCCCATAAACAATAAAAGGCAACACAAGCTACTTTGTCTTTTTTATCCGCAAGCAGCACTGGTGCTTAATGCTTCTCGTCGATTTCGTTACACCTTGGACTTGAAAAAACAAGAAGAGAAGACACAAATATTGAGAAAGATTAGAGCTCATGCACAAGCCATTAGGGCAGCATATCTTTTCAAAGCAGCCGGGGATGGTCAAGTGATTGAAACCACAAAGCCTCCTGTGGCCTCTGCTGGTGAATTTCCAATTGGACAAGAGCAACTTGCTTCAGTTTCAAGGGAGCATGATACCGTTGCTCTTCAGCAATATGGAGGGGTTGCTGGGATATCAAATTTGTTGAAAACCAATTTAGAGAAGGGGATTCATGGTGATGATGCTGACTTACTAAAACGAAGGAATGCATTTGGTTCCAATGATTATCCTCGAAAGAAAGGAAGAAGTTTCTGGATGTTTATGTGGGATGCTTGCAAGGATCTGACTTTGATTATTTTAATGGTAGCTGCAGCGGCTTCATTGGGTATTGAGGAAGGATGGTATGATGGGGGAAGCATTGCTTTTGCAGTTATTCTTGTCATTGTTGTCACAGCTATAAGTGACTATAAGCAGTCTCTTCAGTTTCGGAACCTGAATGAAGAGAAGAGAAATATCCATTTGGAGGTTATCAGAGGTGGTAGAAGGATTGAAATCTCTATAGAGATTGTTGTTGGTGATGTTATACCCCTCAATATTGGTAACCAGGTCCCTGCTGATGGAATTTTGATCACTGGTCACTCTCTTGCAATTGATGAATCAAGTATGACTGGGGAGAGCAAAATTGTCCATAAAGATTCTAAGGACCCTTTTTTGATGTCTGGGTGTAAAGTTGCAGATGGCAGTGGTACTATGCTGGTAACTGGTGTTGGTGTTAATACTGAATGGGGGCTTCTAATGGCCAGCATTTCAGAAGACACTGGTGAAGAAACACCTTTGCAGGTTCGCTTAAATGGTGTAGCCACCTTCATCGGTATTGTTGGTCTCTCTGTTGCTGTTGTTGTTCTGATTGTGCTACTGGCCAGATTTTTCTCCGGCCATACCAGAGATGCAAGTGGCAATGTTCAATTTAAAGCAGGGAAGACTAAAGTTGGTGATGCTATTGACGGGGCAATTAAGATAGTAACTGTTGCGGTCACTATTGTAGTGGTTGCAGTACCAGAAGGGCTCCCGTTAGCAGTTACCTTAACACTGGCGTACTCAATGAGGAAAATGATGGCGGATAAAGCTTTGGTGAGGAGGCTTTCCGCTTGTGAGACAATGGGCTCTGCAACAACCATTTGCAGTGATAAGACTGGCACGTTGACCATGAATCAGATGACTGTGGTTGAGGCTTATGCTGGTGGGAAGAAGAATGATCCTCCTGGTAACAAGTCAGAGCTCTCTCCCAAGCTCCACTCTTTGCTCATTGAAGGTGTTGCACAGAACACTAATGGCAGTGTTTTTGTCCCTGAGGGTGGTAACGATGTTGAGGTTTCCGGATCACCAACAGAAAAGGCAATTTTACATTGGGGATTAGAGATTGGGATGAACTTCGACTCTACTAGATCGGAATCATCAATTATTCACGTTTTCCCTTTCAATTCTGAGAAAAAACGAGGCGGAGTTGCAGTACAAACGGCTGACTCTGAAGTTCACATACACTGGAAAGGTGCTGCTGAGATTGTCCTAGCCTGCTGTACACGGTACATTGATGCAAATGACCAGTTGGTAGACATGGATGAGGAAAAGATGGTATCTTTCAGAAAAGCTATTGAAGACATGGCTGCCGAGAGTTTACGTTGTGTTGCCATTGCATATAGAACATTTGAAAAGGAGAATGTTCCAGCCACTGAAGAAGAACGGGCTCACTGGTCTTTACCAGAAGATAATCTTGTTTTGTTAGCTATTGATCCTTGTCGACCTGGAGTCAAAGATTCAGTGGAGCTTTGCCAAAAATCTGGGGTTAAGGTAAAAATGGTCACTGGTGACAATGTCAAAACTGCAAAAGCAATTGCTGTGGAGTGTGGAATACTTAATTCCCTTGCTGAAGCTACAGAGCCAATCATCATTGAAGGAAAAACTTTTCGTGCCATGACAGATGCACAGAGAGATGAAATAGCTGAAGCAATATCAGTTATGGGACGGTCATCTCCTAATGACAAATTATTGCTTGTGCAAGCATTGAGGAGGAAGGGACATGTTGTGGCTGTAACTGGGGATGGAACAAATGATGCTCCTGCACTACATGAGGTTGTGAGATGGGGACGTTCTGTGTATGCAAATATTCAGAAATTTATCCAGTTTCAGCTTACAGTAAATGTAGCAGCTCTTGTTATAAATGTTGTTGCTGCTGTTTCCTCTGGTGATGTCCCACTGAATGCAGTGCAGCTTTTGTGGGTAAATCTTATCATGGATACTTTGGGAGCACTAGCATTGGCAACTGAACCACCAACTGATCACCTTATGGATCGGCCTCCAGTGGGCCGAAGAGAACCTCTCATAACAAATATTATGTGGAGAAATTTGCTGATACAGGCAATGTACCAAGTATCTGTGTTGCTTGTTCTGAATTTCCGAGGTAGGAGCATACTGGGTCTGACACATGACAAAAATGATCATGCAATTAAAGTGAAAAACACTCTGATCTTCAATGCATTTGTTCTGTCTCAAATCTTTAATGAGTTCAATGCACGAAAGCCAGATGAGTTTAACATATTCAGTGGAGTCACGAAAAACTACCTCTTCATGGGTATAGTGGGATTAACTGTTGTGCTTCAGATCATCATCATCGAATTCCTCGGCAAGTTCACTTCAACAGTCAGGCTTAATTGGAAGCAGTGGCTGATCTCTGTCATCATTGGGTTCATAAGTTGGCCTCTTGCTGTGGTTGGTAAATTGATACCAGTTCCAGATACTCCCATCAACAACGTATTTTCAAGATTTCGGGGTCGAAGAAAGGAACCTGAGGCCTCACAATAG 3084 0.427 MPLFYEVLSGVILKKEDEQERRNKSATVTNPINNKRQHKLLCLFYPQAALVLNASRRFRYTLDLKKQEEKTQILRKIRAHAQAIRAAYLFKAAGDGQVIETTKPPVASAGEFPIGQEQLASVSREHDTVALQQYGGVAGISNLLKTNLEKGIHGDDADLLKRRNAFGSNDYPRKKGRSFWMFMWDACKDLTLIILMVAAAASLGIEEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRNLNEEKRNIHLEVIRGGRRIEISIEIVVGDVIPLNIGNQVPADGILITGHSLAIDESSMTGESKIVHKDSKDPFLMSGCKVADGSGTMLVTGVGVNTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLSVAVVVLIVLLARFFSGHTRDASGNVQFKAGKTKVGDAIDGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEAYAGGKKNDPPGNKSELSPKLHSLLIEGVAQNTNGSVFVPEGGNDVEVSGSPTEKAILHWGLEIGMNFDSTRSESSIIHVFPFNSEKKRGGVAVQTADSEVHIHWKGAAEIVLACCTRYIDANDQLVDMDEEKMVSFRKAIEDMAAESLRCVAIAYRTFEKENVPATEEERAHWSLPEDNLVLLAIDPCRPGVKDSVELCQKSGVKVKMVTGDNVKTAKAIAVECGILNSLAEATEPIIIEGKTFRAMTDAQRDEIAEAISVMGRSSPNDKLLLVQALRRKGHVVAVTGDGTNDAPALHEVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRPPVGRREPLITNIMWRNLLIQAMYQVSVLLVLNFRGRSILGLTHDKNDHAIKVKNTLIFNAFVLSQIFNEFNARKPDEFNIFSGVTKNYLFMGIVGLTVVLQIIIIEFLGKFTSTVRLNWKQWLISVIIGFISWPLAVVGKLIPVPDTPINNVFSRFRGRRKEPEASQ* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1110 1027 Pfam Cation transporting ATPase, C-terminus 825 1002 IPR006068 -
Amo03g1110 1027 Gene3D - 185 489 - -
Amo03g1110 1027 SUPERFAMILY Calcium ATPase, transduction domain A 248 342 IPR008250 -
Amo03g1110 1027 Gene3D - 527 669 IPR023299 GO:0000166
Amo03g1110 1027 SFLD p-type atpase 451 785 IPR044492 -
Amo03g1110 1027 Gene3D - 670 782 IPR023214 -
Amo03g1110 1027 PANTHER CALCIUM-TRANSPORTING ATPASE 786 1018 - -
Amo03g1110 1027 PANTHER CALCIUM-TRANSPORTING ATPASE 44 785 - -
Amo03g1110 1027 Pfam Cation transporter/ATPase, N-terminus 135 202 IPR004014 -
Amo03g1110 1027 SFLD Haloacid Dehalogenase 451 785 - -
Amo03g1110 1027 Pfam E1-E2 ATPase 248 447 - -
Amo03g1110 1027 PANTHER CATION TRANSPORTING ATPASE 786 1018 - -
Amo03g1110 1027 PANTHER CATION TRANSPORTING ATPASE 44 785 - -
Amo03g1110 1027 Gene3D - 783 1005 - -
Amo03g1110 1027 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 410 492 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo03g1110 1027 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 475 678 IPR023299 GO:0000166
Amo03g1110 1027 SUPERFAMILY HAD-like 457 785 IPR036412 -
Amo03g1110 1027 Pfam Cation transport ATPase (P-type) 528 603 - -
Amo03g1110 1027 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 124 785 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Amo03g1110 1027 PRINTS P-type cation-transporting ATPase superfamily signature 469 483 - -
Amo03g1110 1027 PRINTS P-type cation-transporting ATPase superfamily signature 688 698 - -
Amo03g1110 1027 PRINTS P-type cation-transporting ATPase superfamily signature 773 792 - -
Amo03g1110 1027 PRINTS P-type cation-transporting ATPase superfamily signature 293 307 - -
Amo03g1110 1027 PRINTS Sodium/potassium-transporting ATPase signature 213 233 - -
Amo03g1110 1027 PRINTS Sodium/potassium-transporting ATPase signature 588 606 - -
Amo03g1110 1027 PRINTS Sodium/potassium-transporting ATPase signature 462 483 - -
Amo03g1110 1027 SMART Cation_ATPase_N_a_2 133 207 IPR004014 -
Amo03g1110 1027 Gene3D - 139 320 - -
Amo03g1110 1027 ProSitePatterns E1-E2 ATPases phosphorylation site. 471 477 IPR018303 -
Amo03g1110 1027 Gene3D - 45 92 - -
Amo03g1110 1027 SUPERFAMILY Calcium ATPase, transmembrane domain M 134 1004 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1110 Amo-Chr3 24839767 24855301 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1110 45 1021 Primary Pumps ATPases AT5G57110 71.512 0.0 1463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1110 K01537 - gmx:100792945 1632.85