Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1102 CGCTGTCGCAACGTCCGTGGAGCCACTACCACTGTTCGCGCAACCACGCTCCATCGCCAAGTCAGCCCTCGAAAATCACAGCCATCGCCAGTGCCACTTTTCGTCGCGCAGTTAGGGACCACTGACGCTAGCTCTGTTCAACCATTCCACCCCTTCAGCCTCCTCTTGCCAGCCACTGTCCCTGTCCCCGTCAGCTTTGCTTTTTTCCAAACTTCCAGCTTTTCAGTTCTGTTCAAGCATGTCCGAAGATATAAAAGCAGAGCTTTCAAGTTTGTGCGAGTTGCTGTCCATGTCCTGCTTGCTAGAATCTATGATGTTAATGACCCCAACATTGAGTTCGTGTTCAAGTTCCGCACCCATTTCGGAGGGGGAAAATTCACTGGTTTTGGAAGTCCAAATTCTTTTGACAATGCATATTATAAGATTCTTTTGGAGAAGTCTTGGGCAAATTTAGGTGGTATGTCAAGTATGATTGGCCTTTCTTCAGATCTCAAATGCTGGTTTTGTTCTCAAATGATTCAATATTAG 528 0.4678 RCRNVRGATTTVRATTLHRQVSPRKSQPSPVPLFVAQLGTTDASSVQPFHPFSLLLPATVPVPVSFAFFQTSSFSVLFKHVRRYKSRAFKFVRVAVHVLLARIYDVNDPNIEFVFKFRTHFGGGKFTGFGSPNSFDNAYYKILLEKSWANLGGMSSMIGLSSDLKCWFCSQMIQY* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1102 175 Pfam Ribosomal protein S24e 96 130 IPR001976 GO:0003735|GO:0005840|GO:0006412
Amo03g1102 175 Gene3D - 85 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1102 Amo-Chr3 24541992 24543554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1102 100 130 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 70.968 2.83e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1102 K00434 - nnu:104592451 58.9214