Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1087 GCATATAGAAGCTTTCTGTTAAGGCATCGAAAGGATGAAATCAGATGCAATAATGGTAAAGTTCAACTCAATTTAGTAATTGAAAGTCCAAATAGAAAGTCCATGGGAACCTCAGTTGAAGACGAAAACAAAGCAGAAAAATGGGATGATACCACTGTGAGTAGCTATGTATCGAAAATGCGAATGCAGAACAGAATGGAGGCATCAACCAGAAGAGAAAGAGCACTAGCTTATAATGAGGAAGACGGCGATGGAACCAAGAAGACGGCAACGCTCTCTGGAACACACAAGATGATGACGCTCTCTGACGTGACGATGTTCTTCTCGGCTGGGTGA 336 0.4256 AYRSFLLRHRKDEIRCNNGKVQLNLVIESPNRKSMGTSVEDENKAEKWDDTTVSSYVSKMRMQNRMEASTRRERALAYNEEDGDGTKKTATLSGTHKMMTLSDVTMFFSAG* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1087 111 PANTHER IQ-DOMAIN 5-RELATED 45 78 - -
Amo03g1087 111 PANTHER IQ-DOMAIN 5-RELATED 1 40 - -
Amo03g1087 111 PANTHER IQ-DOMAIN 33 45 78 - -
Amo03g1087 111 PANTHER IQ-DOMAIN 33 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1087 Amo-Chr3 23612939 23613786 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1087 46 78 IQD Protein Family AT5G35670 69.697 1.36e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1087 - - adu:110278533 125.176