Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1063 ATGAAGACAATAACATCTTTCCTCGTAGTTTGTGTGTTACTGTCTTGTTTCCTTGGGGCTTGCCACGGAGGCAACCTTAGGAAAAATTTCTATAGAAATTCCTGTCCTCAAGCTGAAGCTATTGTTAAGACCAAAATCCAACAACACGTTGCTGCAAGGCCTGAATTGCCAGCCAAATTGATTAGGATGCATTTTCATGACTGTTTCGTCAGGGGTTGTGATGGGTCGGTTTTGTTAGACTCAACTGCCACAAACAAAGCGGAGAAGGATGCTATTCCTAATTTATCATTGGCTGGCTATGATGTCATTGATGATATAAAAGCAGAAATTGAAGCAAAATGTTCCGGAGTTGTATCTTGTGCTGACATTCTGGCATTGGCAACTAGAGACGCTTTTTCTGTCCAATTTAATAATGTGCCTCTGTGGGAAGTGCTTACTGGTAGAAGAGATGGGAGAGTGTCCATAGCAAGTGAAGCCTTGGCCAATCTCCCACCACCTTTCTTCAATTTCGCCCAGCTCAAACAAAGCTTCGAAAGTAAAAAACTCACCGTGCATGACCTCGTTGTATTATCAGGTGCACACACAATTGGAGTAGGGCATTGCAATCTCTTCAGCAATAGGCTTTTCAATTTCACTGGAAAAGGTGATCAAGATCCTTCACTAAACCCCACATATGCTGACTTCTTGAAGACAAAATGCCAGGCACTAAGTGACACAACCACAACGGTGGAGTTGGATCCTAATGGCTCTACCAAATTTGACAATGACTATTATAACATCCTTGTACAGAACAAGGGTCTGTTCCAATCAGATGCTGCGCTTCTAACAACAAAGACATCAAGGAACATTGTCAATGAATTGCGTAACCAAAACAAGTTCTACACGGAGTTTGGACAATCAATGCAGAGAATGGGAGCCATTGAAGTCCTCACTGGCTCTGCTGGGGAAATTAGGCATAAGTGTTCTGTTGTCAACTCCAATTAA 984 0.4238 MKTITSFLVVCVLLSCFLGACHGGNLRKNFYRNSCPQAEAIVKTKIQQHVAARPELPAKLIRMHFHDCFVRGCDGSVLLDSTATNKAEKDAIPNLSLAGYDVIDDIKAEIEAKCSGVVSCADILALATRDAFSVQFNNVPLWEVLTGRRDGRVSIASEALANLPPPFFNFAQLKQSFESKKLTVHDLVVLSGAHTIGVGHCNLFSNRLFNFTGKGDQDPSLNPTYADFLKTKCQALSDTTTTVELDPNGSTKFDNDYYNILVQNKGLFQSDAALLTTKTSRNIVNELRNQNKFYTEFGQSMQRMGAIEVLTGSAGEIRHKCSVVNSN* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1063 327 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Amo03g1063 327 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo03g1063 327 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo03g1063 327 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo03g1063 327 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo03g1063 327 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo03g1063 327 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo03g1063 327 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo03g1063 327 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo03g1063 327 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo03g1063 327 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo03g1063 327 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo03g1063 327 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo03g1063 327 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo03g1063 327 PANTHER PEROXIDASE 8 324 - -
Amo03g1063 327 Gene3D - 29 325 - -
Amo03g1063 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Amo03g1063 327 ProSiteProfiles Plant heme peroxidase family profile. 25 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo03g1063 327 Gene3D Peroxidase, domain 2 164 304 - -
Amo03g1063 327 SUPERFAMILY Heme-dependent peroxidases 26 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo03g1063 327 CDD secretory_peroxidase 25 324 IPR033905 GO:0004601|GO:0042744
Amo03g1063 327 Pfam Peroxidase 42 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo03g1063 327 PANTHER PEROXIDASE 25-RELATED 8 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1063 Amo-Chr3 23276005 23279993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1063 7 326 Peroxidase AT1G05260 52.761 2.35e-118 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1063 K00430 - gsj:114405310 537.724