Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1060 ATGCCTTCGAGGTGCACTGAGGAGTTCCGCCTCAGGAAGATCAACAATGACAAACTGAAGGCTGAGGCAAAGGCTAATGGACAAAAGATCAGTACCAAGAGACAGCCTGAGGGACCTAAACCTGGATTCATGGTTGAAGGTGCCACATTAGAGACTGTGACTCCCATTCCATATGATGTTGTCAATGATCTTAAAGGAGGTCAATGGCGCAAGGATCCGGATTGGTACATTTTTTTGTTTTGGGCCGGTTTAGCATGTGATTATGTAGTAAAAGGAGGAGCTAGAGGCAATGGCGCAAGGATCCCAGAACACTGGTGCCACAAGATGATTTGTTTAAACAAATGTGAATCACAGAAATGTTATGAAGAGTGCTCTAAAGAACAATATGGCAGTGGAGATTGCAAGGGTGCCACTTGCTTATGCACATACTATTGTAAAGATCCTCCACTCTACTAA 456 0.4408 MPSRCTEEFRLRKINNDKLKAEAKANGQKISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGQWRKDPDWYIFLFWAGLACDYVVKGGARGNGARIPEHWCHKMICLNKCESQKCYEECSKEQYGSGDCKGATCLCTYYCKDPPLY* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1060 151 Gene3D - 3 60 - -
Amo03g1060 151 MobiDBLite consensus disorder prediction 22 41 - -
Amo03g1060 151 PANTHER 60S RIBOSOMAL PROTEIN L21 2 67 IPR001147 GO:0003735|GO:0005840|GO:0006412
Amo03g1060 151 PANTHER 60S RIBOSOMAL PROTEIN L21-1 2 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1060 Amo-Chr3 23244503 23249692 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1060 3 67 Cytoplasmic Ribosomal Protein Gene Family AT1G09690 84.615 2.51e-34 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1060 K02889 - gmx:100305629 131.339