Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1037 ATGTTTCCAGCAACCATACCACTACTTCCAGTGCTCTTTGTCACACTCGCCCTCCCCATCACCGTATTGTTCCTAAAAAGAAAACATCATGATAGATCACTCCCACCGGGACCACCGGCATTTCCGGTCTTCGGTAACCTGCCCATGCTGCTGGGGAAGTTCCCACACCGCACACTCCAAGCCATGGCCCAAAAATACGGCCCAATTATGTCCCTTCGTTTTGCGAGCCGTCGCAAAACCCAGGCAAGCGAGTACGTATCATACGGCTCCAAAGGGCTGTTGTTCTCGGAGTACGGTACGTACTGGCGCAACATGAAGAGATTGTGCACGTCGCAGCTTCTGAGCGCGTCGAAGGTGTCGTCTTTTGCTGGTGTTAGGGAGAGAGAAGTGGAAGCGACGGTGAAATCGATCAAGAGAGCTGCAGCGAGAGGTGAGGCGGTGAATATTACTGAGGCGGTGAATCATCTTGTTGATTTGACTGCCCTAGTTCATGATGCTATTAGCGTCAGTGGAGCCTTTAATATCGCAGATTATGTGCCCTGGCTTGGATCTTTTGACCTTCTTCTGGGATCCACACGAAGGTTGAAGAAAATTGCTAAAGCTGTTGACCAAGTGTTGGAGAAGATAATTGAGGAGCATCACACTAGAGGTTCTGGTTCGGGTGCATGCCATGCCTCGAGGGACCACAGGGATTTCATTGACATATTACTCTCCCTTATGAACCAACCCGTTGATCCACGTGATGAACAGAGCCAAGTCATGGATCGAACCAACGTTAAGGCTATACTCCTAGATACTATTGCAGGCTCATTTGAAACTTCTGCAACCGTTATTGTATGGGTTTTATCCGAGCTGTTAAAGCATCCAAGAGTGATGAGAAACCTTCAAGACGAGCTAGCTAATTTGGTTGGATTGAACAAATTTGTGCAAGAGACCCATTTGGCAAACCTAAGTTACTTGGATATTGTGATCAAAGAAACATTACGATTACATCCTGCTGGAGCATTTTTTCCCCGCGAAACAATTAAAGATACGATGGTTAATGGTTATCATATAAGAGAAAAGACAATAATCATAATAAACTTATGGGCATTGGGAAGAGATCCTAAGGCATGGTCTAATAATGCTAATGAGTTTTATCCCGAAAGATTTTTAACTAAAAATTTTGACTATCGTGGCTACAGCTTTCAGTTTATACCATTTGGTTCTGGTAGCAGAGGATGTCCTGGAATACACCTAGGACTAACTATGGTGAAACTTATTGTGGCTCAGTTAGTACATTGCTTCACCTGGGAATTACCATCGAACATGACGCCAGATGAGTTGGACATGAACGAGAAATTTGCTCTCACACTGACTAAAGCCAAGAACTTACATGCTGTGCCAACGTATCGTCTTCTTTGTGAAGTCTAA 1413 0.4494 MFPATIPLLPVLFVTLALPITVLFLKRKHHDRSLPPGPPAFPVFGNLPMLLGKFPHRTLQAMAQKYGPIMSLRFASRRKTQASEYVSYGSKGLLFSEYGTYWRNMKRLCTSQLLSASKVSSFAGVREREVEATVKSIKRAAARGEAVNITEAVNHLVDLTALVHDAISVSGAFNIADYVPWLGSFDLLLGSTRRLKKIAKAVDQVLEKIIEEHHTRGSGSGACHASRDHRDFIDILLSLMNQPVDPRDEQSQVMDRTNVKAILLDTIAGSFETSATVIVWVLSELLKHPRVMRNLQDELANLVGLNKFVQETHLANLSYLDIVIKETLRLHPAGAFFPRETIKDTMVNGYHIREKTIIIINLWALGRDPKAWSNNANEFYPERFLTKNFDYRGYSFQFIPFGSGSRGCPGIHLGLTMVKLIVAQLVHCFTWELPSNMTPDELDMNEKFALTLTKAKNLHAVPTYRLLCEV* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1037 470 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 73 466 - -
Amo03g1037 470 Gene3D Cytochrome P450 22 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g1037 470 SUPERFAMILY Cytochrome P450 35 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g1037 470 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 21 74 - -
Amo03g1037 470 PANTHER CYTOCHROME P450 FAMILY PROTEIN 73 466 - -
Amo03g1037 470 PRINTS P450 superfamily signature 399 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g1037 470 PRINTS P450 superfamily signature 322 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g1037 470 PRINTS P450 superfamily signature 269 286 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g1037 470 PANTHER CYTOCHROME P450 FAMILY PROTEIN 21 74 - -
Amo03g1037 470 Pfam Cytochrome P450 175 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g1037 470 PRINTS E-class P450 group I signature 278 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g1037 470 PRINTS E-class P450 group I signature 408 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g1037 470 PRINTS E-class P450 group I signature 398 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g1037 470 PRINTS E-class P450 group I signature 258 275 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g1037 470 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g1037 470 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 401 410 IPR017972 GO:0005506|GO:0016705
Amo03g1037 470 Coils Coil 292 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1037 Amo-Chr3 22616920 22618692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1037 41 468 Monolignol Biosynthesis Gene Families AT4G36220 34.310 3.17e-95 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1037 - - gmx:100814172 508.834