Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1033 ATGCTAATGAATCCACAACGAAAACAATGCTTTTTGCTGTTTTCATTTTCTGTTTTTTTTATTCATTGTTTTGATTCTCATGCATTTCTTCTGGAGAAGTTTATGAACCAGTTGTTCGAGAAGTGTCCTAAGCAGATCGGTATCGAAGGAGCATTGCTGCCAAAGAGGGATTTGACTCGTTTCATGAAGTGGCTGACCGTACAAATCCAGGGGAAGAAGAGGATCCTCAAGCAGAGGTTGAAGGTTCCACCAGCTTTGAACCAGTTCACCAAGACCCTTGACAAGAACTTTGGCAAAGGATCAAGTCACGACCCCATTGGACAAAATCCGTCGGTAATTTTATTTAATTACTCTATCGGTCCCTATAGTTTTACTAAATTTTTAATTAGGTCCCTATACTTTTTTTTTCTTTTCAATTGGGTCCATGTACCATATCAAATTTTGTAA 447 0.3826 MLMNPQRKQCFLLFSFSVFFIHCFDSHAFLLEKFMNQLFEKCPKQIGIEGALLPKRDLTRFMKWLTVQIQGKKRILKQRLKVPPALNQFTKTLDKNFGKGSSHDPIGQNPSVILFNYSIGPYSFTKFLIRSLYFFFLFNWVHVPYQIL* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1033 148 PRINTS Ribosomal protein L7A family signature 43 60 IPR001921 -
Amo03g1033 148 PRINTS Ribosomal protein L7A family signature 79 98 IPR001921 -
Amo03g1033 148 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 32 102 - -
Amo03g1033 148 PANTHER 50S RIBOSOMAL PROTEIN L30E-RELATED 32 102 - -
Amo03g1033 148 Gene3D - 65 101 IPR029064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1033 Amo-Chr3 22541185 22554832 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1033 32 98 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 67.647 8.44e-25 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1033 K02936 - qsu:112034675 104.76