Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1019 ATGGGTTTGGGTGCTGAGAATGGTAAGGTGGTGGAGCATTTGGATGTGTGTAAATCAAARGGTGGGAAAAAGAARAAGAAGAAAGAGAGTGGGATAGTTGAAGAGGAACAAGAGACTGGGTGTTGGGTTAGGCTTAGGTTATTTGGGAGCTGCATTTCTTCAAGATCCAAGGTTGATAGCTCTGTTAGTGGCACCAGCACCAATTATGCCGAAAGTAAATCAACTATTGACACAAGTAGAGACCAACCAACGCTTCCAGTTGTCTCTTCTACAACAACTAGTAATGCTGAAAGCAATGCATCCACTTCCAAACTTGAAGAGGAGCTTAAAGTTGCTTTGAGGCTGCGAAAGTTCACTTTCAATGATCTTAAGTTGGCAACAAGAAATTTTCGGCCCGAGAGTCTTCTTGGYGAAGGTGGGTTTGGTTGTGTGTTCAAGGGATGGATCGAAGAAAATGGAACTGCTCCTGTGAAACCTGGTACRGGGCTCACTGTTGCTGTAAAAACCCTCAACCATGATGGACTCCAGGGTCATAAAGAATGGCTGGCTGAAGTAAATTTTCTGGGTGATYTAGTTCATCCAAACCTTGTTAAACTTATAGGTTACTGTATCGAAGATGATCARAGGTTGCTAGTATATGAGTTCATGCCTCGGGGAAGTCTAGAAAACCACTTGTTTAGGAGATCCCTGCCTCTTCCATGGTCCATTAGGATGAAAATTGCACTGGGAGCTGCAAAAGGTCTTGCTTTTCTTCACGAGGAAGCAGAACGACCAGTAATATATCGGGATTTCAAGACTTCCAATATACTATTGGATTCGGACTACAATGCCAAGCTCTCTGACTTTGGACTCGCAAAAGATGGTCCTGAGGGTGATAAAACCCATGTCTCCACTCGAGTGATGGGAACCTATGGTTATGCAGCACCAGAGTATGTCATGACAGGACATCTTACGTCAAGAAGTGATGTGTATAGTTTCGGAGTAGTACTACTTGAGATGTTGACTGGCAGAAGATCTATGGACAAAAACCGACCCAATGGCGAACATAACCTCGTGGAATGGGCTAGACCGCATCTAGGAGAGAAAAGAAGGTTCTACCGGTTGATAGACCCTCGYTTGGAGGGTCACTTCTCCATAAAAGGAGCTCAGAAAGCARCTAGTTTGGCTGCACATTGCCTTAGTAGAGATCCAAAGGCAAGGCCTCTCATGAGTGAAGTCGTAGAAGCTTTAAAGCCTCTGCCAAACCTCAAGGACATGGCTAGTTCATCATATTATTTCCAGACAATTCAAGCYGACCGGTTCAGTGCAAGCCCGAATACTAGAAACGGACGAACACAAGGCGCATTACTGACGCGGAACGGGCAGCATCCGAGGAGCCTTTCGATACCACATGGTACACATGCATCTCCATATCACCATCAGTTTCCCCAACAATCACCAAAACCAAATGGAAAGGCACAGAGTTGA 1467 0.4472 MGLGAENGKVVEHLDVCKSKGGKKKKKKESGIVEEEQETGCWVRLRLFGSCISSRSKVDSSVSGTSTNYAESKSTIDTSRDQPTLPVVSSTTTSNAESNASTSKLEEELKVALRLRKFTFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDSDYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGEKRRFYRLIDPRLEGHFSIKGAQKAXSLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTIQADRFSASPNTRNGRTQGALLTRNGQHPRSLSIPHGTHASPYHHQFPQQSPKPNGKAQS* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1019 488 MobiDBLite consensus disorder prediction 435 462 - -
Amo03g1019 488 CDD STKc_IRAK 136 413 - -
Amo03g1019 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Amo03g1019 488 PANTHER OS01G0588500 PROTEIN-RELATED 61 476 - -
Amo03g1019 488 MobiDBLite consensus disorder prediction 471 488 - -
Amo03g1019 488 MobiDBLite consensus disorder prediction 63 101 - -
Amo03g1019 488 Gene3D Transferase(Phosphotransferase) domain 1 216 431 - -
Amo03g1019 488 Pfam Protein tyrosine and serine/threonine kinase 134 410 IPR001245 GO:0004672|GO:0006468
Amo03g1019 488 ProSiteProfiles Protein kinase domain profile. 130 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g1019 488 ProSitePatterns Protein kinases ATP-binding region signature. 136 168 IPR017441 GO:0005524
Amo03g1019 488 MobiDBLite consensus disorder prediction 435 488 - -
Amo03g1019 488 SUPERFAMILY Protein kinase-like (PK-like) 116 431 IPR011009 -
Amo03g1019 488 Gene3D Phosphorylase Kinase; domain 1 89 215 - -
Amo03g1019 488 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 61 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1019 Amo-Chr3 21980387 21983863 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1019 106 410 Glycoside Hydrolase AT3G07070 56.818 2.56e-117 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Amo03g1019 PK_Tyr_Ser-Thr 4.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1019 - - gmx:100807510 874.389