Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1003 ATGCAAGAAAGGAAAACCCACTACAGCAGAGCCTGCTCCCTCGTGGGAGACACCAGGGACAAATTTAGTTACATGGGTCGTGGAAAAACAGAACTGAAGTGCCTCTCAACTGAGAAAGATCGGAAAGGCAGATTCAAGACAAGAATCAAGGGACTAGAGAGCAAAATGAAGAAATTTTCTGACAAATGCCAAGGATCCGAAGCATGCTTGATAGTTTATGAAGAAGGTAGCAACGCTGCACCAATGATTTGGCCAAAAGATTCTACAAAAGTCAGGTCCTTAATTAAAAAGTATGAATCTCAAAAGAATGTGAAGCCTCCTAAGATCTTTGATCTCCAAGACTTCTTTGAGCACAAGAAGACCTCGGTTGAAGGCGAAACTTTGAAAGCGCGAAAATGCATGTACAGCGTCAAGTATCCCACTTCTGACTTGAATATCAAGAGCTTTGATTTGGAACAACTGAGGATGTTCATTGGTATATTGGATAACAAGATTGGTGCGTGTGCTGAAAGGATTAACATGCTTAAAAATAGTCAAAAAGTTGAAAGTAACTTCAATTTTGGACACAATGTTGATCGGTACAACTCTCAGATTCAACCTATGATGCCACTTAGTTATGATACGGGTTCTAGTTCCCAAATGGGTCTCCTCAATCCAAATCCTATGGAATTGATGGGAAGTAATTATGGACTGGTGAATTGTGCTAATCAGTTTGAAGATTCTGTGTATAGTGTTATACAAAACGGTGCTTTAGCAAACTCAACAAAAGTGAAGGAGCCAGAGCCTATGGTTCATTATGACACAAATGTGATGGAGGACACTACTAGCAAGAAAGATGAAGTCCGTTTGGTTTGTACTGAGAAGACAATTGATAAAGTAAATTCCACAAATCAAGTTAGTGAGGCTTTGGATTGGGAAAGTCAATTTGCTGAGGCTGAGGCATGGGCTAGTGACTTTGGTGAGTTTGAGAATTGGATAAATCAACAAAGTGAGCATTCGGATTGGACAAACCTGACTGAATTTGTCTGTTGA 1032 0.4002 MQERKTHYSRACSLVGDTRDKFSYMGRGKTELKCLSTEKDRKGRFKTRIKGLESKMKKFSDKCQGSEACLIVYEEGSNAAPMIWPKDSTKVRSLIKKYESQKNVKPPKIFDLQDFFEHKKTSVEGETLKARKCMYSVKYPTSDLNIKSFDLEQLRMFIGILDNKIGACAERINMLKNSQKVESNFNFGHNVDRYNSQIQPMMPLSYDTGSSSQMGLLNPNPMELMGSNYGLVNCANQFEDSVYSVIQNGALANSTKVKEPEPMVHYDTNVMEDTTSKKDEVRLVCTEKTIDKVNSTNQVSEALDWESQFAEAEAWASDFGEFENWINQQSEHSDWTNLTEFVC* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1003 343 PANTHER MADS BOX PROTEIN 28 271 - -
Amo03g1003 343 PANTHER PROTEIN, PUTATIVE-RELATED 28 271 - -
Amo03g1003 343 ProSiteProfiles MADS-box domain profile. 25 76 IPR002100 GO:0003677|GO:0046983
Amo03g1003 343 SUPERFAMILY SRF-like 25 103 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1003 Amo-Chr3 21644101 21645711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1003 25 171 Type I MADS-box Gene Family AT5G55690 31.169 1.98e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1003 - - adu:107479968 596.66