Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1001 ATGGTGTCTAATTTGCAAGCCATGCATCTCACAATCTTGCATCTTAATGTCACCACCACTAACAATGATATTGTCCTCTATTCTCTCAGCATTAAGGTGGAAGATGATTGCAAGTTGGGATCAGTGGATGAGATAGCCACGGCTGTGTGCCAAATGATGGAAAACATTCAATATGAGTCTGTTGTGGCTGGAGATCTTGAACTGAATCATGAATGCAGTTTGATGCACTGGTGGCCAGAGAATTTCGAATCTAAATTGCAGGGGATCTTGATTAATGGACAATTTCCAGGGCCCACTATAAATGCGGTTACAAACAATTTAAAAATACCAAGGGATGAATTGGAAGTGAATCTCAAGAGTTGGACTGTTAGCTCAATATCTAGCTTTCAGAATATTTACTTTTTGGGTGACTTCTTATCAGAACTTGAAATCATGGCTCATGTAAGCCACACCAACACTGCTAAATTGGTTGGTTATGGTGTGGAAGGTGGAATGCATCTGGTTCTTGAATTGTCTGAAAAAAGAAGCCTAGCTTCCGTTCTTTATGGGTCCAAGGAGAAGCTTCCGTGGTCTATTAGTGGGTTTGTGGTCAGCGGGTTAGCACAGAAGCCAACCCAATTGATAAAAGGTTTCAACTTTGACTACACCAAGCAGAGTCCTGTGACATATGTGCCTCTAATATCGTGTGCTGGTGTTGTTGGTGGCCATGATTCAGTGAAGGAAATTGCAGCTAGTAAGTGGGTGGGTCAAAGGCTGTTACCTCCTAAACAGAATGTGCAGGTTATTGTTTCATTGGAAGTGCTCAAATCAGGTTACAATAGAAATCTTGGGGTATTTTAG 840 0.4155 MVSNLQAMHLTILHLNVTTTNNDIVLYSLSIKVEDDCKLGSVDEIATAVCQMMENIQYESVVAGDLELNHECSLMHWWPENFESKLQGILINGQFPGPTINAVTNNLKIPRDELEVNLKSWTVSSISSFQNIYFLGDFLSELEIMAHVSHTNTAKLVGYGVEGGMHLVLELSEKRSLASVLYGSKEKLPWSISGFVVSGLAQKPTQLIKGFNFDYTKQSPVTYVPLISCAGVVGGHDSVKEIAASKWVGQRLLPPKQNVQVIVSLEVLKSGYNRNLGVF* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1001 279 Gene3D Transferase(Phosphotransferase) domain 1 108 210 - -
Amo03g1001 279 PANTHER BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN 192 279 IPR009617 GO:0019915
Amo03g1001 279 SUPERFAMILY Protein kinase-like (PK-like) 131 201 IPR011009 -
Amo03g1001 279 PANTHER PROTEIN (SEIPIN), PUTATIVE-RELATED 192 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1001 Amo-Chr3 21493726 21496233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1001 2 59 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 48.276 3.60e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1001 - K19365 ahf:112790262 242.662