Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0978 ATGGAAAACCGGCTGAAAATGCGAATCTCTCGCATGTTTCGGTCATCATTCGGGTCTTGCCGGAACCGGAACATCACTGACGTTATGGAAAAGGCAGTGTTCACCCCACCACCCAACCACCACGGTGGCTTCCACCACCTCATCATGATAGAGCCACCGCCACCTCCACCATCAAGACCCCGTCCCTTTCCCTCCATTTGCAAACCCAAGTCCTCCCAAACTTTCAAAACCGTCGACGACAATTGCATCTTGTCGTTTAAGGATTCTCTCCCAAGACGCACCAGAGTCTCCGAGCTCTCATCACCCTTTGCCGTGGACGGCGGCGGTTTCTGCCCCCCTGCGGCACCAAACACACCCCTCAACACAATCTACGAACACGAGAAGACGAAGAACAAGAACTCATCGTCAGCGAGAGACTTCAAGAACAAGAAGAAAAAGAAGAAGAATAAGAAGAAGATGGTTAATGCCCATAAGAAAAGAGACATGTTCCCGTTTAATTCTTGCGCCAAAGACACAAACTTTGGAGGTTATTGGTGGTATAGCAGCGACGAAGACGACGAAACAGACACGCTTTTCTCCTCCAAGAGCCTCTCTTCCGACTCCTCAAGGTCTCGCCGGCGCCACCGTTCTCGCCGGAAAAACCGTGGCGGAGGGCGGAGCTCCGATACGGGCGTGATGCCATTGCAAGGGAAGGTGAAGGACACTTTCGCTGTGGTGAAGCGATCCAGTGATCCATACAGTGACTTCAGGACTTCCATGGTGGAAATGATCGTTGAGAAGCAGATATTTTCACCAAATGGTTTGGAGAATCTGTTGCAGTGTTTTCTTTCTCTGAATTCCTATCATCATCATAACCTCATTGTAGAGGTCTTCACCGAGATTTGGGAAGCGTTGTTCTCTGACTGGTTTTGA 912 0.5011 MENRLKMRISRMFRSSFGSCRNRNITDVMEKAVFTPPPNHHGGFHHLIMIEPPPPPPSRPRPFPSICKPKSSQTFKTVDDNCILSFKDSLPRRTRVSELSSPFAVDGGGFCPPAAPNTPLNTIYEHEKTKNKNSSSARDFKNKKKKKKNKKKMVNAHKKRDMFPFNSCAKDTNFGGYWWYSSDEDDETDTLFSSKSLSSDSSRSRRRHRSRRKNRGGGRSSDTGVMPLQGKVKDTFAVVKRSSDPYSDFRTSMVEMIVEKQIFSPNGLENLLQCFLSLNSYHHHNLIVEVFTEIWEALFSDWF* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0978 303 MobiDBLite consensus disorder prediction 126 159 - -
Amo03g0978 303 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 236 299 IPR006458 -
Amo03g0978 303 MobiDBLite consensus disorder prediction 192 227 - -
Amo03g0978 303 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 301 IPR038933 GO:0045892
Amo03g0978 303 MobiDBLite consensus disorder prediction 139 157 - -
Amo03g0978 303 PANTHER TRANSCRIPTION REPRESSOR OFP8-LIKE 1 301 - -
Amo03g0978 303 Pfam Transcriptional repressor, ovate 242 299 IPR006458 -
Amo03g0978 303 ProSiteProfiles OVATE domain profile. 238 297 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0978 Amo-Chr3 21072062 21072973 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Amo03g0978 Ovate 1.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0978 - - adu:107478678 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2432 13 42710049 42710960 Amo03g0978 03 21072062 21072973 hybridization