Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0913 ATGGCTAATGATGATCAGAAAACCATCCTCTCCCAAATCTCTCATGCTTCTGAATCCGAATCCTCAGAGCACCATAGCCCCGGAAGCTTCGCTACGCCACCTGGTAGTGATTCAGCAAACTCAGCCACTAAAAGTGATGCAAACCAAAAAGAAAACAAAATATCTACCTCTGAGGTTGAGAGATACATTCTCGCACCCCGTGCCATCATTGCTAGTGATGGCAATACCCTATCAGGATCAAAAAGGCCACGTGGCAGGCCACGTGGCTCCAAGAACAAGCCAAAGCCACCGATCATCATAAGGCAAGTAAATGACCATGGCATGCGGCCAATCTTCATCGAGATTGCCGAAGGAGTCGATATTGTGGAGGGTTTAATCGACTTTGCCGTGCACCGTCGTATCGGAATCTCAATCCTAAGCGGTTGTGGGTCCATCTCTGAGGCCGTAATTCACAACGTGCTATCCAGTTCTCTTGACATACCTATTCACGGGCCATTTAATTTGATGTCCCTTTCTGGAACATATTTTGATGGCCATGTCGCACATCCTCCATGCTCTGCTTTCTCGATTCTTCTTGCAGGATCACATGGCCAAGTTTTTGGCGGGTTAGTTGGAGGAAAGGTTTTGTCAGGTGGAACTGTGAAAATCATGGCTATCTCATTCGAGAGGCCAGAGATTCACGAATTGAACCTCAATGCAAAAAGAGAGGATCCTAATATGGTTACTCGATGTAGTGTGGCTAATCCAATTCTTCCTCTTAAAGTTGCCAACCATTGTGGTCGCGCTGGTGTTGGTGTTGGTGTTGGTAGTGCTGGTGTGAAGAATGAAAATATGGTGATAGAAGATAACCATCAGGCATAA 861 0.4623 MANDDQKTILSQISHASESESSEHHSPGSFATPPGSDSANSATKSDANQKENKISTSEVERYILAPRAIIASDGNTLSGSKRPRGRPRGSKNKPKPPIIIRQVNDHGMRPIFIEIAEGVDIVEGLIDFAVHRRIGISILSGCGSISEAVIHNVLSSSLDIPIHGPFNLMSLSGTYFDGHVAHPPCSAFSILLAGSHGQVFGGLVGGKVLSGGTVKIMAISFERPEIHELNLNAKREDPNMVTRCSVANPILPLKVANHCGRAGVGVGVGSAGVKNENMVIEDNHQA* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0913 286 Pfam Plants and Prokaryotes Conserved (PCC) domain 109 222 IPR005175 -
Amo03g0913 286 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 21 263 IPR014476 GO:0003680
Amo03g0913 286 SUPERFAMILY AF0104/ALDC/Ptd012-like 107 228 - -
Amo03g0913 286 Gene3D - 108 238 - -
Amo03g0913 286 ProSiteProfiles PPC domain profile profile. 105 243 IPR005175 -
Amo03g0913 286 MobiDBLite consensus disorder prediction 73 98 - -
Amo03g0913 286 MobiDBLite consensus disorder prediction 1 58 - -
Amo03g0913 286 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 21 263 - -
Amo03g0913 286 CDD DUF296 109 221 IPR005175 -
Amo03g0913 286 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0913 Amo-Chr3 19274035 19274997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0913 73 229 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 38.037 1.11e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0913 - - adu:107496595 465.692