Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0903 CAGAAGAGAAGCGATCGAACCATGGCTTGTTCGATTCGTCCCACTCTCTCTTCGTTTCGCTTTTCAACCGTTGCTTCTCGTTCTCTCTCCCGCCCCTTCCTCCGCCTTCCCTCTATCACTACCAGAGCATTAGGTGAATCCAATAGATTGAGAGCAACGAGGATGGTGAGGCGAGATGGGAATTTCATGAGAGTGATGGCTTCCCAAGCAAGCACCGCTGCTTCCCCCGAGAACACACTCGAATGGGTCAAGCAAGATAAGCGAAGGATGCTTCATGTTGTCTACCGTGTTGGCGATTTGGACAGGACTATCAAGTTTTATACAGAGTGCCTGGGAATGAAGCTCCTCAGGAAGCGTGACATACCTGAGGAGAGATATACTAATGCCTTTCTTGGATATGGCCCCGAAGATTCGCACTTTGTTATTGAACTCACTTACAATTATGGAGTTGACAAGTATGACATTGGAGCTGGATTTGGACATTTCGGCATTGCTGTTGATGATGTTGCAAAAACAGTGGAACTAATAAGAGCGAAGGGTGGCAAGATAACTAGAGAGCCTGGTCCTGTCAAGGGAGGCAGCACGGTCATTGCATTCATTGAAGATCCTGATGGCTACAAATTTGAACTTTTGGAGAGAGGCCCCACTCCTGAGCCCTTGTGCCAAGTGATGCTTCGAGTCGGTGATCTTAAGCGTTCCATAGAATTTTATGAGAAGGCTTTTGGTATGGAGCTCCTTCGCACTCGAGATAATCCAGAATACAAGTATACCATAGCAATGATGGGTTATGGTCCAGAAGATAAAAGTACTGTTCTGGAATTGACTTACAATTATGGAGTCAAAGAATATGATAAAGGAAATGCTTATGCTCAGATAGCAATAGGCACAGATGATGTGTACAAAACTGCAGAAGCTGTTAAGTTAGCTGGAGGAAAGATTACTCGGGAACCTGGACCACTGCCTGGTATCAACACAAAAATTACAGCATGCTTGGATCCTGATGGTTGGAAGACGGTTTTTGTAGATAATGTTGATTTCCTTAAGGAGTTGGAGTAA 1056 0.4508 QKRSDRTMACSIRPTLSSFRFSTVASRSLSRPFLRLPSITTRALGESNRLRATRMVRRDGNFMRVMASQASTAASPENTLEWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDDVAKTVELIRAKGGKITREPGPVKGGSTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLKRSIEFYEKAFGMELLRTRDNPEYKYTIAMMGYGPEDKSTVLELTYNYGVKEYDKGNAYAQIAIGTDDVYKTAEAVKLAGGKITREPGPLPGINTKITACLDPDGWKTVFVDNVDFLKELE* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0903 351 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 219 343 IPR037523 -
Amo03g0903 351 Gene3D - 216 351 IPR029068 -
Amo03g0903 351 ProSitePatterns Glyoxalase I signature 1. 222 243 IPR018146 GO:0004462|GO:0046872
Amo03g0903 351 TIGRFAM glyox_I: lactoylglutathione lyase 77 222 IPR004361 GO:0004462|GO:0046872
Amo03g0903 351 TIGRFAM glyox_I: lactoylglutathione lyase 220 343 IPR004361 GO:0004462|GO:0046872
Amo03g0903 351 CDD GlxI_Ni 90 211 - -
Amo03g0903 351 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 222 337 IPR004360 -
Amo03g0903 351 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 90 210 IPR004360 -
Amo03g0903 351 PANTHER LACTOYLGLUTATHIONE LYASE CHLOROPLASTIC-RELATED 23 351 - -
Amo03g0903 351 PANTHER LACTOYLGLUTATHIONE LYASE 23 351 - -
Amo03g0903 351 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 220 343 IPR029068 -
Amo03g0903 351 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 88 218 IPR029068 -
Amo03g0903 351 CDD GlxI_Ni 220 341 - -
Amo03g0903 351 Gene3D - 60 214 IPR029068 -
Amo03g0903 351 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 89 213 IPR037523 -
Amo03g0903 351 ProSitePatterns Glyoxalase I signature 1. 92 113 IPR018146 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0903 Amo-Chr3 18832387 18835566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0903 222 340 Calmodulin-binding Proteins AT1G08110 28.966 1.71e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0903 K01759 - gmx:100780463 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo03g0903 03 18832387 18835566 Amo05g3849 05 104778303 104781865 PCT
Amo05g3849 05 104778303 104781865 Amo03g0903 03 18832387 18835566 PCT