Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0869 ATGGGGAACTTTCCAAACGATAGAATGATCCGTAACCCAGTTATACTACAGAGCCACAACTTGACCGTATATACTGGAGACGAGCGTTTTTCCACGAGAAGCAGAGGCTCTCAAAGAAATAAGGAATGCCACTGCAAACCACCCTATGGGGTTGATGAAAGCGGCACCAGATGCCAGTCAGCTAATGGCGTAACTGTTGAAGGTGTTGAATTAATGCCAAAAAAGACAATTGAAATTGGAGTGACTCCCATCATTAAGAATGCTGGCGTCGAACACAAGATCGACTTTATAGACTCTCCGGCATTACCGATTCTTGATGAACTCTTGCAAGATGAGTGCAACGAGGGCAGTTTTGACTTTGCGTTTGTTGACGCTGATAAAAGCAATTATTGGAACTACCATGAGCGCCTTCTAAAACTGATTAGGATTGGAGGGATGATAATATACGATAACACGCTGTGGGGTGGAACCGTTGCATGGAAGGAAGAAGATGTTCCAGCAGAGGGAAGCCGTACTCAGTTTCAACAAAGCAATGTCACAAGATTCTCGCATTGA 555 0.4432 MGNFPNDRMIRNPVILQSHNLTVYTGDERFSTRSRGSQRNKECHCKPPYGVDESGTRCQSANGVTVEGVELMPKKTIEIGVTPIIKNAGVEHKIDFIDSPALPILDELLQDECNEGSFDFAFVDADKSNYWNYHERLLKLIRIGGMIIYDNTLWGGTVAWKEEDVPAEGSRTQFQQSNVTRFSH* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0869 184 Pfam O-methyltransferase 76 167 IPR002935 GO:0008171
Amo03g0869 184 Gene3D Vaccinia Virus protein VP39 56 182 IPR029063 -
Amo03g0869 184 PANTHER O-METHYLTRANSFERASE-RELATED 73 168 - -
Amo03g0869 184 PANTHER METHYLTRANSFERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 73 168 - -
Amo03g0869 184 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 84 162 IPR029063 -
Amo03g0869 184 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 83 184 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0869 Amo-Chr3 17781854 17782672 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0869 72 166 Monolignol Biosynthesis Gene Families AT4G26220 66.316 7.74e-42 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0869 K00588 - gmx:100792717 165.622