Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0868 ATGGGGAGAGCCACAAGGTGGTTTAAGAGCTTGTTTGGGATCAAGAGAGACAAAGAGCGCAGCCATAATTCAAATTCTACCACCAAGTTGTGGGATTCTTCTCATTCGCGCTCAGATTCCGGAGTTTTGTGTCACAATCCGGCAACCATTCCACCCAACATTTCTCCTGCAGAGGCTGCTTGGCTGGAGTCCTTCTACTCCAAAACAGAGAGGGAGCAGAACAAGCATGCCATCGCAGTTGCTGCCGCCACAGCCGCAGCAGCCGATGCAGCAGTGGCTGCCGCTCAGGCCGCTGTGGCAGTTGTGAGGCTAACTAGCCACGGAAGAGACAGCATGTTTGGTGGGCTTGAGAAGTTTGCAGCTGTGAAGATCCAAACCGTTTTTAGGGGATTCTTGGCAAGGAAGGCACTAAGGGCCTTAAAGGGTTTGGTGAAGATACAAGCCATTGTGAGAGGGTACTTGGTGAGGAAGCAAGCAGCAGAAACGCTGCATGGTATGCAGGCTCTTGTTAGAGCTCAGGCTGCAATTCTCTCTCACAAATATGGCCGCGGACTCAGACACATAAGGAATGATGCTTATTGGTTGCCTACACAAGCAAGAAGATCCTTGGAAAGGTTTGATGAGACAAGGACAGAGTATAGAGGTCCAAGCGAGAGCAGAAGGCTATCATCATCATTTGATGCAACAATGAATAGCAGCTATGACGGCAGCCCAAAAATAGTGGAAGTGGACACTGGCAGGCCTAAGTCAAGGTCTCGGAGGACCAACATATCAATGTCTGATTTTGGGGATGACCCTTTGTTTTCATCTCCCTTGCCAGTCCCGTGCCGCGATTGGGGACTAACGGGGGAAGAGGGGAGGTTGTGGACGGCGCAGAGCACGCCGCGCTTGAACAGTTGTAGTTGTGGTGTTTTCATGGATAGTAGCTTGTTGAAGGGGCAACAAGGTCCGAATTATATGGCTAATACAGAGTCATTTAAGGCGAAAAAGAGGTCTCAGAGCGCTCCAAGACAAAGGGGAGAGGCAAGTCCAAGTCCAAGGAACAGTTTGAGTGGGGTTGGGATGTCCAAGATTCATTTAAAGAATGCTGTCATGGCTAAGCTTGAAATGTCCGCAGAGTTTTGTAACCCACACAAGATGAGACACACATAG 1152 0.4974 MGRATRWFKSLFGIKRDKERSHNSNSTTKLWDSSHSRSDSGVLCHNPATIPPNISPAEAAWLESFYSKTEREQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRDSMFGGLEKFAAVKIQTVFRGFLARKALRALKGLVKIQAIVRGYLVRKQAAETLHGMQALVRAQAAILSHKYGRGLRHIRNDAYWLPTQARRSLERFDETRTEYRGPSESRRLSSSFDATMNSSYDGSPKIVEVDTGRPKSRSRRTNISMSDFGDDPLFSSPLPVPCRDWGLTGEEGRLWTAQSTPRLNSCSCGVFMDSSLLKGQQGPNYMANTESFKAKKRSQSAPRQRGEASPSPRNSLSGVGMSKIHLKNAVMAKLEMSAEFCNPHKMRHT* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0868 383 Gene3D - 117 175 - -
Amo03g0868 383 MobiDBLite consensus disorder prediction 325 353 - -
Amo03g0868 383 MobiDBLite consensus disorder prediction 237 264 - -
Amo03g0868 383 MobiDBLite consensus disorder prediction 337 352 - -
Amo03g0868 383 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Amo03g0868 383 Pfam Protein of unknown function (DUF4005) 292 345 IPR025064 -
Amo03g0868 383 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 367 - -
Amo03g0868 383 Pfam IQ calmodulin-binding motif 120 138 IPR000048 GO:0005515
Amo03g0868 383 Pfam IQ calmodulin-binding motif 144 158 IPR000048 GO:0005515
Amo03g0868 383 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Amo03g0868 383 MobiDBLite consensus disorder prediction 18 38 - -
Amo03g0868 383 PANTHER IQ-DOMAIN 5-RELATED 1 367 - -
Amo03g0868 383 SMART iq_5 116 138 IPR000048 GO:0005515
Amo03g0868 383 SMART iq_5 139 160 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0868 Amo-Chr3 17751601 17753227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0868 1 355 IQD Protein Family AT3G16490 46.373 6.64e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0868 - - adu:107478572 705.286