Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0867 ATGTCAAATTTTCATTCCATTTTCCATGTGACATTACTCTTTCTTCTTGTTCTGCAAAATCCAAGAGCAACAGAATGCCACACCAAGGGAATTCGACCGGGGCGTTCTTCTGTGGGGAGTGTGATTCCCATAAACAGAACACGAGCCCAATTATCAGAAGAGCAGTTCATGAGATGGGTCAAGTTCGTCGGTGGCCTCAAACACTCTGTCTTCGGCATTGCCATGAACAAGCTCTTCCCTTCTCACACACTTCACGTTTCCAAGAAACACGGCAAAGGAGGCTTCTCTTCTATTCAATCAGCCGTTGATTCTCTTCCATTCATCAACCTTGTTAGAGTTGTAATTAAGGTCCATGCAGGGGTTTACACAGAGAAAGTTAACATTCCACCATTGAAATCGTTCATAACGATAGAAGGAGAAGGCGCAGATAAGACGATAGTTGAATGGGGTGATACTGCTGATAAGGCGGCACCTGGGACTAAAGGGCAATTACTAGGAACCTTTGGCTCTGCCACATTCGCGGTGAATTCAGCTTACTTCATAGCCAAGAACATCACATTCAAGAACACGGCACCCGTTCCGAGGAACGGAGCAGTGGGGAAGCAGGCAGTGGCGCTGAGAATTTCAGGAGACACAGCCATGTTTCTTGGATGCAAATTCTTGGGAGCACAGGACACACTGTATGATCACCTTGGGAGGCATTACTACAAGGATTGTTACATTGAAGGGTCCGTTGATTTCATATTCGGCAACGCGCTCTCTTTGTTTGAGGGGTGTCACGTGCATGCAATAGCACAGAATGTAGGGGCAGTAACAGCGCAAGGGAGGAGCAGCATATTGGAGGACACGGGGTTCTCATTTGTGCACTGCAAGGTCACGGGGTCAGGGGCTCTGTACCTTGGAAGGGCATGGGGTCCCTTCTCTCGTGTTGTCTTTGCTTACACCTACATGGACAATATCATCATTCCCAAAGGCTGGTATAACTGGGGCGACCCCAACCGTGAAATGACTGTATTCTATGGGCAATACAAATGCACAGGACCTGGAGCAAGCTTTGCTGGGAGAGTAGCATGGTCAAGGGAACTCACTGATCAGGAAGCTAAACCATTTATTTCACTTGCCTACATTGATGGCTCTGAGTGGATCAAATCCCTTTTTTGA 1161 0.4737 MSNFHSIFHVTLLFLLVLQNPRATECHTKGIRPGRSSVGSVIPINRTRAQLSEEQFMRWVKFVGGLKHSVFGIAMNKLFPSHTLHVSKKHGKGGFSSIQSAVDSLPFINLVRVVIKVHAGVYTEKVNIPPLKSFITIEGEGADKTIVEWGDTADKAAPGTKGQLLGTFGSATFAVNSAYFIAKNITFKNTAPVPRNGAVGKQAVALRISGDTAMFLGCKFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAQNVGAVTAQGRSSILEDTGFSFVHCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGPGASFAGRVAWSRELTDQEAKPFISLAYIDGSEWIKSLF* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0867 386 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 4 384 - -
Amo03g0867 386 PANTHER PECTINESTERASE 4 384 - -
Amo03g0867 386 Gene3D - 81 385 IPR012334 -
Amo03g0867 386 ProSitePatterns Pectinesterase signature 2. 241 250 IPR033131 -
Amo03g0867 386 Pfam Pectinesterase 88 378 IPR000070 GO:0030599|GO:0042545
Amo03g0867 386 SUPERFAMILY Pectin lyase-like 80 384 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0867 Amo-Chr3 17749049 17751101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0867 89 383 Carbohydrate Esterase AT1G05310 48.185 2.29e-101 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0867 K01051 - gmx:100793773 652.514