Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0866 ATGGGGAACAAGATCGCTCGGACGACGCAGGTGTCGGCGTCGGAGTACTACCTTCACGAGCTGCCGTCGACGTACAATCTGGTGCTGAAGGAGGTGCTCGGACGGGGCCGTTTCTTCAAGTCGATTCAGTGCAAGCACGACGAGGGCCTCCTCCTCGTTAAGGTCTATTTCAAGCGCGGCCATTCCATCGATCTCTCCCCCTACGAACGCCGTCTCTCTCAGATCAAGCACATTTTCCTCTCCATTCACCATCCTCACCTTTGGCCCTTTCAGTTTTGGCAAGAAACCGATAAAGCAGCATACCTTCTCAGGCAGTATTTTTTCCATAATTTGCATGATCGACTAAGCACTCGACCTTTTCTCAGTTTCATCGAGAAGAAATGGCTGGCTTTCCAGTTGCTTTTAGCTGTGAAACAGAGCCACCATGAGGGGGTGTGTCATGGTGATATTAAGTGTGAGAATGTGTTGATTACATCTTCGAATTGGCTTTATCTTGCTGACTTCGCATCTTTCAAGCCCACCTACATCCCATATGATGATCCATCAGATTTCTCTTTCTTCTTTGACACTGGTGGAAGAAGGCTCTGTTATCTGGCACCTGAGAGATTTTATGAACATGGAGGGGAAATGCAGATGCCGCAAGATGCCCCTTTAGAGCCATCCATGGATATATTTGCTGTCGGGTGTGTAATTGCAGAACTTTTTCTCGAGGGACAGCCACTGTTTGAACTGTCCCAACTTCTTGCTTATCGCAGAGGGCAATATGATCCTAGTCAACATCTTGAGAAAATACCAGATCCTGGAGTCCGTAAGATGATACAACACATGATTCAGTTAGAACCGGAGTTGCGGCTTTCTGCTGAAAGCTATCTAGAGGAATATGCTGCAGTTGTATTCCCAACATATTTTTCACCTTTTTTTCACGATTTTTTCTGCTGCTGGAGTCCTCTCCAACCTGATATGAGGATTTTGTTATGCCAAAGTGCTTTCCAGGAGATATTTAAACAAATGATGAACAACAATAACCATTCATCTGGCCCCCAGCATGTGAAAGGAGATTCACCTAATTCTACATTTCCTGAAAATCTTCAAACTTTGCAATCTTCTGGAGAGCTGCTTCAAGCTATCTCCAATGAATTTCAAGGAACTGATCACCCGTTTCTGAAAAGGATCACTTTGAATGACTTAAGTTCATTGAAGTCTGAAAATGATAATCAATCAGATACATGCGACATGCCCTTTTTACCGTTGTCAAACAATATTATGAAATGCGAAGGCATGGTTTTGATAACTTCTTTGCTCTGTTCCTGCCTGCGCAATGTCAAGTTTCCTCACCTGAGGAGGGCAGCTTTACTCTTGCTGAAGGCTTCTGCCTTATACATTGACGATGAAGACCGTTTGCAGCGTGTTATCCCATACGTGATTGTAATGCTTTCAGATTCAGCTGCGATTGTGCGATGTGCTGCCTTAAAGACTTTGTGTGACATTCTGCCCTTAGTCCAAGACTTTCCTCCAAGCGATGCAAAGATATTTCCTGAGTATATACTTCCCATGCTTTCTATGCTTCCTGATGATCCAGAGGAAAGTGTGAGAATATGTTATTCCAGAAACATAGCTAAGTTGGCACTAACTGGTTATGGATTCTTGATACGCTCAATAAGGTTAAGAGAGGCAGGCGTCCTTGATGAATTGAACTCACCACGAAAACCATTAATATCCTCTGCTCAGACCCCTGGAAAACTAAAGAGGATAAATACTGATGCGCAACTTGCGCAGCTGAGGAAATCCATAGCGGAAATTGTCCAAGAACTTGTTATGGGTCCAAAGCAAACACCAAATATTAGGCGAGCACTTCTTCAGGACATTGGTAGACTGGGCTGGTTCTTTGGGAGGAGACAGAGTAACGACTTTCTGTTACCTGTCCTCCCTGCTTTCCTAAATGATCAGGATGAGCAATTAAGGACAGTATTCTATGAAAAGCTGGTTTATGTCTGCTTTCTTGTGGGCCAAACCAGTGTAGAAAAATATCTATTGCCATACATCGAGCAGGCTTTAAGTGACAAAACAGAGGCAGTAATTGTTAAAGCCTTGGATTGCTTGACTATTCTATGCAAAAGTGGGTTCTTCCGGAAGAGGATACTGCTTGAAATGATAGAGCACAGTTTTCCCTTACTAGGTTATCCCAGTGAATGGGTAAAACGATCAGCTGTTTCTTTTATTGCTGCTAGTAGTGAGAGCTTGGGTACAGTAGATTCCTATGTTTTTCTTGCTCCTGTTATACGACCTTTCCTCCATAGACAACCTGTAACACTTGCTTCAGAGCAGGTACTTTTGTCATGTTTGAAACCTCCTGTCTCAAGACAGGCTTTTTATGAAGTCTTGGAGAACTCTAGGAGTTCAGACATGTTAGATAGACAGAGAAAAATATGGTATAATTCATCATCACAATCTACACTCTGGGAAATAGATTTTCTGAAAAAGGGAATTGAGGGGTTGAACACACTGGACAATTGGGCAGACAAGCAACAAGGTCCTGGGGTTCAACAAGCTGTTGGTACTGGCTTCCAACAGCTAGGACTATCAGATTGTGACACAGGTGAGGCAAATTTGAGAGATACAAAGAGCTTTTTACATAGTGCTAGCAATATAGTGGGACATAATGATCTCCGATCTTCGGAGAAGTTACAATTTTCAGGACTTACATCACCATATGGTAGTGGCATAAACAATTTCACATACAAAAGGCCATCAGAAGGGATACCTTTGTACTCTTTCTATGCGGACAGGCAGGGAATGGGAATTCCTCCAGCATCAGATTCTCCAGTGCAAATGAATTCTCCTGGTCGCAGTTCGTCTTCCATGCCTTGGGTTACTTCAGTCAGTAATTCCTTCAATTTGGCTAGTTCAGTTCCAGCACCAAAGTCTGCTTCGGAATCTTTTAGCATTAACAGCGGACCTAAACAGTTCTACCGAGTTGTACATGAGCCAGATGGCAGGGAAAATGAAACATGTGTTAATAGCACATTTCAAGATGCGGGACTGTCTAAAGCTAGTTCAATTTTAATGGAAGATGCAACCGCCCAAACTGATCCGTCAGGATTTTCCTGTCACTCATCCATTCCTGGCTGGAGGCCCCGTGGGGTGTTGGTTGCACATCTCCAGGAGCACAGTTCAGCTGTAAATGAAATAGCTATTTCCAATGATCATAGCTTCTTTGTGAGTGCATCTGATGACTCTACAGTCAAAATCTGGGATTCAAGAAAACTGGAAAAGGACATTGCTTTTAGGTCAAAGCTAACTTATCACCTGGGGGGAAGCCGAGCATTATGTGCAGCAATGCTTTGGGGATCTACGCAAGTAATTGTTGGAGCATCTGATGGACTGATTCATATGTTCTCTATTGATCATATATCTAGAGGTTTGGGAAATGTCGTTGAGAAGTATTCTGGTATTGCTGATATCACTAAAAAGGATATCAAGGAAGCTGCTATACTCAGCCTTTTGAAAAGCCCAGTGGATAATCATACAGTCATGTATAGCACCCAAAACGGTGGTATTCATATGTGGGATACTAGATCAGATTCCAATGTATGGACTCTAAAAGCTATTCCAGAGGAGGGCTATGTTTCTTCTGTAGCCTCAGGGCCTTGTGGTAATTGGATTGTATCAGGGTCATCAAGGGGTGTTCTTACACTTTGGGATCTGAGGTTTCTTATACCTGTGAACTCTTGGCAGTATTCTCCTGCTTGCCCTATAGAAAAAATTTGTCTCTTTCTTCCTCCTCCAAATGGCCCTCCTCCTCCCACTTCTAGGCCTCTTGTTTATGTTGCTGCTGGTTGCAATGAAGTTTCTCTTTGGAATGCGGAGAATGGCACTTGTCACCAGGTATTGAAGTCGGCCAATTATGACAATGATGCAGAATTGTCTGATCGGCCTTGGGCATTGGCCAGACATTCAAGTAAACTAAGTTCTAAATCAAATCATAGAAGAAATATCAATCCCAAGTACAATGTTGATGAACTAAATGAACCTCCTCCTCGTCTTCCTGGTATCCGTTCACTACTTCCTTTGCCAGGGGGTGATTTATTGACTGGGAGCACCGATTTGAAGATACGCCGATGGGATCATTGCAGTCCGAAAAAAAGTTATTGTATTTGTGGCCCAACCTTAAAAGGAGTAGGAAATGATGATTTTTATGAAACAAAATCTAGCTTTGGAGTGCAAGTTGTACAGGAGACAAAAAAACGCCCACTTACAATAAAGCTAACCGCAAAGGTAGTTCTTGCTGCTGCTGCCACTGATCCTGCGGGTTGCCATCGTGATTCTATCCTTTCTCTGGCTTCTGTAAAGTTAAACCAGAGACTCTTGCTATCAAGTGCTAGAGATGGGGCTATCAAGGTTTGGAAGTAA 4410 0.4317 MGNKIARTTQVSASEYYLHELPSTYNLVLKEVLGRGRFFKSIQCKHDEGLLLVKVYFKRGHSIDLSPYERRLSQIKHIFLSIHHPHLWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSFIEKKWLAFQLLLAVKQSHHEGVCHGDIKCENVLITSSNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGEMQMPQDAPLEPSMDIFAVGCVIAELFLEGQPLFELSQLLAYRRGQYDPSQHLEKIPDPGVRKMIQHMIQLEPELRLSAESYLEEYAAVVFPTYFSPFFHDFFCCWSPLQPDMRILLCQSAFQEIFKQMMNNNNHSSGPQHVKGDSPNSTFPENLQTLQSSGELLQAISNEFQGTDHPFLKRITLNDLSSLKSENDNQSDTCDMPFLPLSNNIMKCEGMVLITSLLCSCLRNVKFPHLRRAALLLLKASALYIDDEDRLQRVIPYVIVMLSDSAAIVRCAALKTLCDILPLVQDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYSRNIAKLALTGYGFLIRSIRLREAGVLDELNSPRKPLISSAQTPGKLKRINTDAQLAQLRKSIAEIVQELVMGPKQTPNIRRALLQDIGRLGWFFGRRQSNDFLLPVLPAFLNDQDEQLRTVFYEKLVYVCFLVGQTSVEKYLLPYIEQALSDKTEAVIVKALDCLTILCKSGFFRKRILLEMIEHSFPLLGYPSEWVKRSAVSFIAASSESLGTVDSYVFLAPVIRPFLHRQPVTLASEQVLLSCLKPPVSRQAFYEVLENSRSSDMLDRQRKIWYNSSSQSTLWEIDFLKKGIEGLNTLDNWADKQQGPGVQQAVGTGFQQLGLSDCDTGEANLRDTKSFLHSASNIVGHNDLRSSEKLQFSGLTSPYGSGINNFTYKRPSEGIPLYSFYADRQGMGIPPASDSPVQMNSPGRSSSSMPWVTSVSNSFNLASSVPAPKSASESFSINSGPKQFYRVVHEPDGRENETCVNSTFQDAGLSKASSILMEDATAQTDPSGFSCHSSIPGWRPRGVLVAHLQEHSSAVNEIAISNDHSFFVSASDDSTVKIWDSRKLEKDIAFRSKLTYHLGGSRALCAAMLWGSTQVIVGASDGLIHMFSIDHISRGLGNVVEKYSGIADITKKDIKEAAILSLLKSPVDNHTVMYSTQNGGIHMWDTRSDSNVWTLKAIPEEGYVSSVASGPCGNWIVSGSSRGVLTLWDLRFLIPVNSWQYSPACPIEKICLFLPPPNGPPPPTSRPLVYVAAGCNEVSLWNAENGTCHQVLKSANYDNDAELSDRPWALARHSSKLSSKSNHRRNINPKYNVDELNEPPPRLPGIRSLLPLPGGDLLTGSTDLKIRRWDHCSPKKSYCICGPTLKGVGNDDFYETKSSFGVQVVQETKKRPLTIKLTAKVVLAAAATDPAGCHRDSILSLASVKLNQRLLLSSARDGAIKVWK* 1470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0866 1469 SUPERFAMILY Protein kinase-like (PK-like) 26 312 IPR011009 -
Amo03g0866 1469 ProSiteProfiles Trp-Asp (WD) repeats profile. 1436 1469 IPR001680 GO:0005515
Amo03g0866 1469 CDD STKc_Vps15 16 303 - -
Amo03g0866 1469 Gene3D - 1097 1256 IPR015943 GO:0005515
Amo03g0866 1469 Gene3D - 1038 1096 IPR015943 GO:0005515
Amo03g0866 1469 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1053 1085 - -
Amo03g0866 1469 SMART WD40_4 1193 1234 IPR001680 GO:0005515
Amo03g0866 1469 SMART WD40_4 1341 1375 IPR001680 GO:0005515
Amo03g0866 1469 SMART WD40_4 1046 1085 IPR001680 GO:0005515
Amo03g0866 1469 SMART WD40_4 1423 1469 IPR001680 GO:0005515
Amo03g0866 1469 SMART WD40_4 1096 1133 IPR001680 GO:0005515
Amo03g0866 1469 Pfam HEAT repeat 470 498 IPR000357 GO:0005515
Amo03g0866 1469 MobiDBLite consensus disorder prediction 1319 1343 - -
Amo03g0866 1469 Gene3D Transferase(Phosphotransferase) domain 1 21 342 - -
Amo03g0866 1469 Gene3D - 552 782 IPR011989 -
Amo03g0866 1469 Gene3D - 1263 1469 IPR015943 GO:0005515
Amo03g0866 1469 SMART serkin_6 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0866 1469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Amo03g0866 1469 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1436 1469 - -
Amo03g0866 1469 MobiDBLite consensus disorder prediction 341 361 - -
Amo03g0866 1469 ProSiteProfiles Protein kinase domain profile. 27 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0866 1469 Gene3D - 395 547 IPR011989 -
Amo03g0866 1469 SUPERFAMILY ARM repeat 364 766 IPR016024 -
Amo03g0866 1469 Pfam WD domain, G-beta repeat 1049 1085 IPR001680 GO:0005515
Amo03g0866 1469 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0866 1469 ProSiteProfiles HEAT repeat profile. 638 676 IPR021133 -
Amo03g0866 1469 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1469 IPR045162 GO:0004674|GO:0016236|GO:0045324
Amo03g0866 1469 SUPERFAMILY WD40 repeat-like 1047 1469 IPR036322 GO:0005515
Amo03g0866 1469 ProSiteProfiles Trp-Asp (WD) repeats profile. 1053 1085 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0866 Amo-Chr3 17724026 17730707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0866 29 242 MAP Kinase Gene Family AT2G42880 26.786 1.47e-10 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Amo03g0866 Pkinase 6.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0866 K08333 - qsu:112039233 2150.55