Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0855 ATGTGTGGCATGAAGATCGAGGAGTTAGACGATACGGGGAGTAGTAGGGATGAAGAGAAGGGGGAGATGCAGATTGTGAGGGTTGATTCAAAGAGAGCGTTGGTGGGAGCAGTTGCTCGGATCCTGTTTTACCCGACACTCTTGTATAATGTGCTTCGTAACAAGATTGAAGCTGAATTCAGGTGGTGGGATCAAGTTGATGAGTTTTTGTTGCTGGGCGCAGTCCCATTCCCCAAAGATGTTCCTCACTTGAAGAAGCTTGGCGTTGGTGGTGTAATAACTCTTAATGAACCGTATGAAACTTTGGTGCCTTCATCATTGTATCATGCTCATGGAATTGATCACTTGGTAATTCCCACAAGGGATTATCTCTTTGCCCCCTCCTTTGCTGATATCAGCCGGGCTGTGCAGTTCATTCATCAGAATTCAACTTGTGGTAAAACTACTTATGTTCACTGTAAAGCTGGGCGGGGAAGGAGTACAACAATTGTGCTTTGCTATCTGATTGAATACAAGCACATGACAGCTGCTGCTGCCCTGGAATATGTGCGGTCTCAAAGACCCAGAGTGATGCTAGCTCCATCGCAATGGAAGGCTGTTCAAAAWTATAGCAAACGCAGACCTTGTTCTTTSGCACGCTCACCCTCATGGGATGCAGTTCTTATAACCAAAGCTGATCTTGAAGGCTACCAGAGCTCTGGTAATGCTGGTATGGAGCTGGCCATTGCTCCTAAAGTGCCAAAGACTAATCCCATGATATCAAGACTATCTTGTCTGTTTGCATCCTTAAAGACATCCGGAAATAGTGTACCCATGACRAGGTGGTTRCCGGTTTCTGAGTCACGTGCTTGTTAA 855 0.4561 MCGMKIEELDDTGSSRDEEKGEMQIVRVDSKRALVGAVARILFYPTLLYNVLRNKIEAEFRWWDQVDEFLLLGAVPFPKDVPHLKKLGVGGVITLNEPYETLVPSSLYHAHGIDHLVIPTRDYLFAPSFADISRAVQFIHQNSTCGKTTYVHCKAGRGRSTTIVLCYLIEYKHMTAAAALEYVRSQRPRVMLAPSQWKAVQXYSKRRPCSXARSPSWDAVLITKADLEGYQSSGNAGMELAIAPKVPKTNPMISRLSCLFASLKTSGNSVPMTRWLPVSESRAC* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0855 284 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 56 205 IPR029021 -
Amo03g0855 284 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 130 198 IPR000387 GO:0016311|GO:0016791
Amo03g0855 284 ProSiteProfiles Dual specificity protein phosphatase domain profile. 62 209 IPR020422 GO:0006470|GO:0008138
Amo03g0855 284 Pfam Dual specificity phosphatase, catalytic domain 84 204 IPR000340 GO:0008138|GO:0016311
Amo03g0855 284 SMART dsp_5 65 206 IPR020422 GO:0006470|GO:0008138
Amo03g0855 284 CDD PTPMT1 62 206 IPR044596 GO:0004721
Amo03g0855 284 Gene3D Protein tyrosine phosphatase superfamily 62 208 IPR029021 -
Amo03g0855 284 ProSitePatterns Tyrosine specific protein phosphatases active site. 151 161 IPR016130 GO:0016311|GO:0016791
Amo03g0855 284 PANTHER - 4 284 - -
Amo03g0855 284 PANTHER OS01G0739200 PROTEIN 4 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0855 Amo-Chr3 17487431 17491829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0855 4 272 Protein tyrosine phosphatase (PTP) family AT2G35680 48.943 1.09e-95 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0855 - - adu:107478561 570.466