Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0807 ATGGAAAGTGATGGTATGGAGCATCTTGTTGATGACAAAAGTGATGGTATGGAGCATCTTGTTGATGATGACAAAGGTGATGGTGTGGAGCATGTTGTTCATGATAAAAGTGATACTATGGAGCATGCGGATGATGATGATAGTGATGATTCTAGTAGTGACAGCGGTGATGATGATTTACAAGAGGATCAAGGTAAAGGGAATGATGTAAGTCACATGGAGGAGGCTACCATGTTTAAGAATAAAGCCGAACTGAGTAAAGAGGAAGTTTTGAAAATGGTGTTCGATACTCATGAAAAGGCCTATGATTTTTATGTGAGTTATGCTAAGTGTGTTGGATTTAGTGTCCGGAAAGGAGACGTGGCTCGTGATGATGATGGCAAATTGATAAGACGAAGATTTGTATGCAACAGGCAAGGCTTGAGAGACAAAAAGCATTACATGAGAATTGATAGAAAAAGGGATCAGAAACCAGAGACTAGGACGAATTGTCATGCAATGTTGAGTATTTACCTTGACAACCACACCTCAACTTGGAGAGTGAGAACCTTTGAAAAAGGCCACAACCATGAGCTAGCACCCGCTGGATTTGATTACATCGTGCCAAATACTCGTCGGTTAACAACTGCAAAAAAGGCACAAAGTGATGGTATCCGCATACATGGGTTCCTAACATTTCAAATCATGGGTTTTATGGTTGGTCAAGCTAGGGCTTTTGCTGGAGTTGAATTCTCAAAGGACTTGTACAGTTACATTGATAAACAAAGATGTCCTAAGATAGTTGATGGTGATGCACTTGCAGCTATTAGCTATTTGCAGGGTAAGGCTGATTCTGATCCGACGTTGTTTGCTAGGTACACCACTACAGATGATGATCAATTGGGAAACTTGTTTTGGGCTGATGGCTTAAGTCAAGTTGACTATGAGTACTTTGGGGATGTGGTTGGACTTGATACAAAATACAAAGAAAGCATGTACCACAGACGCTTAGTTATCTTTTCTGGTACTAATCATCATCGACAAACTTGTATTTTTGCATGTGCCTTACTAGGTGATGAGCGAGCTGACACATATAAATGGGCATTGGAGAATTTCTTAGATGCAATGGAAAAGAAGCACCCAAGTGCAGTGGTAACTGATGATAATGAGGCCATGAAAGAGGCAATTCAGGTGGTGTTCCCAAATGCTACCCATAGGCTATGTGCTTGGCATCTTCAAAAAGGTGCAGCATACAACATTAGGGATGCTGAATTTGTTGAGGCTTTCAAGAAATCTATTTATACCAACTTTGATCCTGATGAGTTTGAGGAGTATTGGCGTAACATGATACAAAAGTTTGAGGTATGTGACAGTATGTGGGTAGAGGAGACATATAAGAAGAAGGAAATGTGGGCCACGACTTACCTTCGTGATAAGTTCTGTTCTGGACTAAGAGCATCATCACGATGTGAGGGCTTAAACCCATTGATGAAGAAATATATCAAGGCAAGGCACAATATACTCGAATTGGTCCAACACTTTGAGCTTGCATTGAAGGAATTTAGGAACAATGAATTGGTAGCAGAGTTCAATTCCATGTACAATGAGCCTGTTTTGACAACTGCATTAGAATCAATTGAGCGCAAGGCTGCTAAAGTGTTTACGAGGGAAATTTTCAAAGAAGTGCAAAAAGAGTTAGAAGGGGCTGCTTTACTATTTGTTGTTGGATGTGAAAACCTTTCAACGACTGCCACGTTTAAATTGAGTAAGTATGGCAAGCCTGGTTGGGAATACAAGGTGACATATGACAGAGAATCACAGAAATTTGAATGCCAGTGTTGCCTTTGGAGTACCCATGGCATTCCCTGTAGTCACATATTTTGTGTTATGATTTATGAACATATTGCAGAATTACCCGAAAAGATGATTCTTAAAAGATGGACTCAAGCTGCAAAGTCTTTTAATGAGCTTCCGGATGAAGAAGATGAGGTGAATGATAAAAAGTTCTTGTTTCGTTATGGTGCATTATGTGCTGCAAGTAATTGGATGTCATTTCTGGCAGCAAGAAAATTGCATAATTTTCTTGAAACAAAAGATGAAATTTATAAAATCACGGCTAAGCTAGAGCATAAAGGCTGTATGGTGGATACCAGATCATTTTCTATTCCCAAGAATACCATGGATGACACGACCAAGGGTGCATCACTAACTTATAAGAATGGTAAGAAGCGGAGGCGTTGCAAAGCTTGTAACAAGATGGGTCATTCAAAGTCTAGTTGTCCAAGGGTCAAGGACAGAAGGTCTCGAGGAGATGATCTCAGTTCGTCTTCAATGTCAGATAATCCTCGAAATGCGGGTCATGCCACAAATAGCGCAGTGGATCCTCCAAATACTGGTCCTGCAACACATAACACTCTGGATGATCCTCCAAATGCAGGTCCTGCAACAAATAACGAGGTAGGGCACCCTCCAACAGACTCATCGACTGCCATGACACAATCGCTAGCTGTGAATCATGCAGCTGCAGCCTCTCGATTCGGGGTATGGGGACCCCAATTTCTTCTTCCTGGTCCTGGTCAACCTTGTTTTGCCGCAAATATAGGTCACCAATACTATCTTGCAAATCAAGGTGCTAGATATTATCCCCTTGCTCCAGCTCAACAGCAATTTCTTAGACCTCAAGGTTTAGTGCAGCGGTTTGTTCCTCAAGGTGTATTACCCCAGCAATATGTCGGAGGTCCGAATCCTCAATTCCAAGGCTTAGCACAGCAAAAGCGTGGCAAAGGTCGTGCTCGTCGATGA 2781 0.416 MESDGMEHLVDDKSDGMEHLVDDDKGDGVEHVVHDKSDTMEHADDDDSDDSSSDSGDDDLQEDQGKGNDVSHMEEATMFKNKAELSKEEVLKMVFDTHEKAYDFYVSYAKCVGFSVRKGDVARDDDGKLIRRRFVCNRQGLRDKKHYMRIDRKRDQKPETRTNCHAMLSIYLDNHTSTWRVRTFEKGHNHELAPAGFDYIVPNTRRLTTAKKAQSDGIRIHGFLTFQIMGFMVGQARAFAGVEFSKDLYSYIDKQRCPKIVDGDALAAISYLQGKADSDPTLFARYTTTDDDQLGNLFWADGLSQVDYEYFGDVVGLDTKYKESMYHRRLVIFSGTNHHRQTCIFACALLGDERADTYKWALENFLDAMEKKHPSAVVTDDNEAMKEAIQVVFPNATHRLCAWHLQKGAAYNIRDAEFVEAFKKSIYTNFDPDEFEEYWRNMIQKFEVCDSMWVEETYKKKEMWATTYLRDKFCSGLRASSRCEGLNPLMKKYIKARHNILELVQHFELALKEFRNNELVAEFNSMYNEPVLTTALESIERKAAKVFTREIFKEVQKELEGAALLFVVGCENLSTTATFKLSKYGKPGWEYKVTYDRESQKFECQCCLWSTHGIPCSHIFCVMIYEHIAELPEKMILKRWTQAAKSFNELPDEEDEVNDKKFLFRYGALCAASNWMSFLAARKLHNFLETKDEIYKITAKLEHKGCMVDTRSFSIPKNTMDDTTKGASLTYKNGKKRRRCKACNKMGHSKSSCPRVKDRRSRGDDLSSSSMSDNPRNAGHATNSAVDPPNTGPATHNTLDDPPNAGPATNNEVGHPPTDSSTAMTQSLAVNHAAAASRFGVWGPQFLLPGPGQPCFAANIGHQYYLANQGARYYPLAPAQQQFLRPQGLVQRFVPQGVLPQQYVGGPNPQFQGLAQQKRGKGRARR* 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0807 926 MobiDBLite consensus disorder prediction 767 822 - -
Amo03g0807 926 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 78 674 IPR031052 GO:0006355
Amo03g0807 926 Pfam MULE transposase domain 314 407 IPR018289 -
Amo03g0807 926 ProSiteProfiles Zinc finger SWIM-type profile. 591 627 IPR007527 GO:0008270
Amo03g0807 926 MobiDBLite consensus disorder prediction 42 58 - -
Amo03g0807 926 MobiDBLite consensus disorder prediction 1 41 - -
Amo03g0807 926 PANTHER OS03G0181600 PROTEIN 78 674 - -
Amo03g0807 926 MobiDBLite consensus disorder prediction 751 766 - -
Amo03g0807 926 MobiDBLite consensus disorder prediction 740 822 - -
Amo03g0807 926 SUPERFAMILY Retrovirus zinc finger-like domains 722 760 IPR036875 GO:0003676|GO:0008270
Amo03g0807 926 MobiDBLite consensus disorder prediction 905 926 - -
Amo03g0807 926 MobiDBLite consensus disorder prediction 1 71 - -
Amo03g0807 926 Pfam FAR1 DNA-binding domain 103 193 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0807 Amo-Chr3 16497477 16504354 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo03g0807 MULE 1.5e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0807 - - adu:107477751 1853.18