Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0803 CCAGCGGTTTCTCACTATTGGAATCCGGGTGGCTTTAAAGTTATGGGTGTGGAATTTTCTCATGAAGGGGTTAATAGCGAGCATATATCATATGATCAGTATGAGCAGGAGGAAGAAAAACATGAGGAAGTTGACGTAGATTATATGGATGAGGACGACACAAATGTGGAACCAATGTTCGATTATCACGGCTTCGATGAAGGGGATGAAGATGTATGTCATTTTCACTTTTCTGATGTCGACATTGCATTTGAGTTCTACAATAGATATGCAAGGGTAAGAGGCTTTAGTGCTCGAAAGAACAGGACTAGGAAGAGTCGTGCGGGCGTACTTAAGTTGAAGAATTTTGTATGTCATTGCGAAGGATTTAGACCGCAAAATAATTATGGCATTGGAAACTCTAAGAGAAAACCTACTCCCGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTTGTCTAGATGCACCTAGTGGT 477 0.4193 PAVSHYWNPGGFKVMGVEFSHEGVNSEHISYDQYEQEEEKHEEVDVDYMDEDDTNVEPMFDYHGFDEGDEDVCHFHFSDVDIAFEFYNRYARVRGFSARKNRTRKSRAGVLKLKNFVCHCEGFRPQNNYGIGNSKRKPTPETRCGCSAMMEICLDAPSG 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0803 159 Pfam FAR1 DNA-binding domain 85 153 IPR004330 -
Amo03g0803 159 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 32 150 - -
Amo03g0803 159 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 32 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0803 Amo-Chr3 16415695 16417098 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo03g0803 FAR1 1.6e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0803 - - ahf:112723376 255.373