Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo03g0798 | GATAAGCCAGCTTTCATATTCTGTGTCGAAGATAGAGCACTCTTCTGTAAGGATTGTGACGAACCAATTCATTTAGCTGGCAGCCTTTCTACGAACCACCAGCGTGATGAGAAAAGCCACTTGGAACCATCTAATCCAGTTGCAGAACAAGCTCCAAGGAAAGTTCCTTCTCAGCAATCGCCTATAGACGAATTTGGAGAGTTGGAATGGCTAGCAGGTGTTGCTAAAGTTCCTCAGCTTCCTGTGTCACACACTAGCACTCTTGCACCATACACTTTTAAAGCCACTAATAAATCTTACATGTATAGCAAAAAGCCTAGGATCAAAGTCTTAGGTGAAATAGATGATGAGCATTTCACTGTGCCTGATCTAGGCTAA | 378 | 0.4286 | DKPAFIFCVEDRALFCKDCDEPIHLAGSLSTNHQRDEKSHLEPSNPVAEQAPRKVPSQQSPIDEFGELEWLAGVAKVPQLPVSHTSTLAPYTFKATNKSYMYSKKPRIKVLGEIDDEHFTVPDLG* | 126 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo03g0798 | 125 | CDD | Bbox1_BBX-like | 1 | 35 | - | - | |
| Amo03g0798 | 125 | PANTHER | B-BOX ZINC FINGER PROTEIN 24 | 1 | 35 | - | - | |
| Amo03g0798 | 125 | PANTHER | B-BOX ZINC FINGER PROTEIN 24 | 73 | 125 | - | - | |
| Amo03g0798 | 125 | MobiDBLite | consensus disorder prediction | 29 | 59 | - | - | |
| Amo03g0798 | 125 | PANTHER | B-BOX ZINC FINGER PROTEIN 22 | 1 | 35 | - | - | |
| Amo03g0798 | 125 | PANTHER | B-BOX ZINC FINGER PROTEIN 22 | 73 | 125 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo03g0798 | Amo-Chr3 | 16386773 | 16387803 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo03g0798 | 1 | 35 | Orphan Transcription Factor Family | AT1G06040 | 74.286 | 1.60e-13 | 62.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo03g0798 | - | - | gmx:100779183 | 144.05 |