Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0786 ATGGTGGCGCTCCTGCCCCCTGACAGTCAGATAGCCATACTCCATCTCCATCACTCCATGGATGGGCCTGACGAAGAACAGCAGCAGGTTTCGTCGAACTCCATCAAGAGCTGGGCCAAGCAGATTGAGGAGAGCTATCAGCTTCAGCTCCAGCTGGCACTTCGCCTCTCTTCGCAGTCTGCTTCTTCCGACAATCCCAATTTCCTTGACTTGCAACCCACCTCTTCCGATTCGGCCCAGGCAATGTCGCATCGTTTTTGGGTAAATGGTTGTTTGCAATACTCGGACAAAATTCTCGATGGCTTCTACCTAATCCATGGGGTGGATGCTTACACATGGTCGATAAGTTCTGATCTGCAGGATGTTGGTATAATTCCTTCATTTGAATCACTGATGTCAGTAGAACCTTGCGATGACTCGTCAATTGTAGTGGTTGCTATTGATAAATCCAAAGATCCTGGTTTGAGAGACCTGCAAAGTAGAGTAGTCAGTCTTTCAAGTAGCTGGAATTCTCCAAAATTTGCAGCTGTTCAGGTTGCAAATCTTGTTTATAGTAGGATGGGTGGTGGACGTTCAACTAAGGAAAATTTAGGCTCACAGTGGAAGGAGTGCGCCCAAAAACTAAAGAGCTGCCTGAATTCTGTCATTCTTCCGATTGGAAGCTTAGCTGTTGGTCTTTGTGTTCACCGAGCATTGCTGTTTAAAGTGTTAGCTGACTTAATTGACTTACCATGCCGAATTGCTAAGGGATGCAAGTATTGTAGCAGGGATGTTGGCGCTTCATGCATAGTGCAATTTGATTCTGACAGGGAGTATATGATTGATTTAGTTGAAAGGCCTGGGTCAATGTGCCAGCCTGACTCTTTGCTGAACTCTGCATCATCAATGGTGGTCTCTTCACCATTATGTCACCCAAAGTTCAAGACAGTTGAAGCAGCTGAATATACTAAGACATTAGCCCAATCATTTTTCTTGGACAGTCAAGGATTGCACCATATATTTGATACAACATCAGGTGGTAAAATTAATCTTAGTGACAGAATGGATGTAAAAGAAACTAGAACTTCTAGTGCACACTATGCCCATGGGAATGACCACCTAGTTGCATCGGGCCTTAGTGCAGATGACTACGTTTCCGTTACTGAAACAAACCCGTCTGTAGTTGATCTTGGTGTGGAGGACCTAGATATAACATGGAGTGAACTTGTTCTGAAGGAGAACATTGGGGCAGGGTCATTTGGAACTGTCATTCGTGCAGATTGGCGTGGTTCTGATGTTGCTGTGAAGATTCTTAAGGTGCAAGATTTTGATTCTGAGCGAATAGAAGAGTTTCTGAAGGAGGTCTCCCTAATGAAGCGCATGCGGCACCCAAACATTGTACTTCTGATGGGTGCAGTATTTCAACCCCCAAGGTTATCTATAGTAACAGAATATTTATCAAGAGGCAGCTTGTATGAACTTCTGCGCATGCCTGGTGTTGGAATATCACTCAGTGAGATGCGTCGTTTAAGCATGGCTTATGATGTGGCAAGTGGAATGAATTATCTCCATCAAATGAGACCTCCCATTGTTCATGGAGATTTGAAGTCCCCAAATCTTTTGGTTGACAATACATACACTGTCAAGGTAGCTGACTTTGGCCTTTCACGTACAAAGGCAAATACATTCCTTTCATCTAAAACCGCCGCTGGGACACCTGAATGGATGGCGCCAGAAGTCATCCTAGGTAAACCATCAAATGAAAAATGCGATGTATTCAGCTTTGGTGTAATATTGTGGGAACTAGTTACCCTGGAACAGCCATGGAGACAGTTAAATCCTTCACAGGTTGTTGCAGCTGTTGGTTTTATGGACCAAAGACTAGAGATTCCAAGCCATGTAAATCCTCTAGTGACTGCGTTGATTGAGCTCTGTTGGGATACTGATCCCACAAGACGCCCTTCTTTCTCCCATGTTATGAAACGTTTGCGGCAAATAACTGCCGATGCAAATGGGTGA 1998 0.4444 MVALLPPDSQIAILHLHHSMDGPDEEQQQVSSNSIKSWAKQIEESYQLQLQLALRLSSQSASSDNPNFLDLQPTSSDSAQAMSHRFWVNGCLQYSDKILDGFYLIHGVDAYTWSISSDLQDVGIIPSFESLMSVEPCDDSSIVVVAIDKSKDPGLRDLQSRVVSLSSSWNSPKFAAVQVANLVYSRMGGGRSTKENLGSQWKECAQKLKSCLNSVILPIGSLAVGLCVHRALLFKVLADLIDLPCRIAKGCKYCSRDVGASCIVQFDSDREYMIDLVERPGSMCQPDSLLNSASSMVVSSPLCHPKFKTVEAAEYTKTLAQSFFLDSQGLHHIFDTTSGGKINLSDRMDVKETRTSSAHYAHGNDHLVASGLSADDYVSVTETNPSVVDLGVEDLDITWSELVLKENIGAGSFGTVIRADWRGSDVAVKILKVQDFDSERIEEFLKEVSLMKRMRHPNIVLLMGAVFQPPRLSIVTEYLSRGSLYELLRMPGVGISLSEMRRLSMAYDVASGMNYLHQMRPPIVHGDLKSPNLLVDNTYTVKVADFGLSRTKANTFLSSKTAAGTPEWMAPEVILGKPSNEKCDVFSFGVILWELVTLEQPWRQLNPSQVVAAVGFMDQRLEIPSHVNPLVTALIELCWDTDPTRRPSFSHVMKRLRQITADANG* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0786 665 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 378 662 - -
Amo03g0786 665 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 27 354 - -
Amo03g0786 665 ProSiteProfiles Protein kinase domain profile. 402 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0786 665 Pfam Ethylene-responsive protein kinase Le-CTR1 79 283 - -
Amo03g0786 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 523 535 IPR008271 GO:0004672|GO:0006468
Amo03g0786 665 CDD STKc_MAP3K-like 408 656 - -
Amo03g0786 665 SUPERFAMILY Protein kinase-like (PK-like) 381 656 IPR011009 -
Amo03g0786 665 ProSitePatterns Protein kinases ATP-binding region signature. 408 429 IPR017441 GO:0005524
Amo03g0786 665 Gene3D Phosphorylase Kinase; domain 1 395 480 - -
Amo03g0786 665 Gene3D Transferase(Phosphotransferase) domain 1 481 664 - -
Amo03g0786 665 PRINTS Tyrosine kinase catalytic domain signature 476 489 IPR001245 GO:0004672|GO:0006468
Amo03g0786 665 PRINTS Tyrosine kinase catalytic domain signature 517 535 IPR001245 GO:0004672|GO:0006468
Amo03g0786 665 PRINTS Tyrosine kinase catalytic domain signature 564 574 IPR001245 GO:0004672|GO:0006468
Amo03g0786 665 PRINTS Tyrosine kinase catalytic domain signature 583 605 IPR001245 GO:0004672|GO:0006468
Amo03g0786 665 PRINTS Tyrosine kinase catalytic domain signature 627 649 IPR001245 GO:0004672|GO:0006468
Amo03g0786 665 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 378 662 - -
Amo03g0786 665 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 27 354 - -
Amo03g0786 665 SMART serkin_6 402 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0786 665 Pfam Protein tyrosine and serine/threonine kinase 403 656 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0786 Amo-Chr3 16013495 16027890 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0786 38 663 MAP Kinase Kinase Kinase AT5G03730 55.303 0.0 669
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Amo03g0786 PK_Tyr_Ser-Thr 3.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0786 K14510 - gmx:100807496 947.577