Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0743 ATGATGTCACAAATCTTCATGGCAAAACAGAATAGCTGGTTTGGGTGGGTGAAGAGGTTATTCACATCTGAGTCAAACAACAAAAAACCAAAGAAATGGGGATGGGGACTTGGAAGGCTAAAGGGGAAACAACAGTACCCAAAAATCACTGCTCCAAGAAGAGCATTGATTGAAGCAAGTGCAGAGCAAAGAAAGCATGCATTGACAGTGGCAATTGCAACTGCAGCTGCGGCCGAGGCTGCAGTTGCGGCTGCACATGCTGCTGCCGAGGTTGTCAAGCTCACCGGTGGTTCTCGCTCTTATTCGTTCTTGGCCAAAGGTGATCGGAGCCTCGCCGCCATCAAGATTCAAAGCGCTTACCGCGCACATCTCGCAAGGAAAGCATTAAGAGGACTGAAGGGAGTGACAAAACTGCAAGCTCTCATTCGTGGTCAAGCAGTGAGACGTCGAGTGTCCAGGGCTTTGAAGAATTCGGCCACCAGTGCAGTTAAAATCCCGGAAACAATCAGCCAAATAGAAGAAAGGTACAGAAAAGACCAGATAATTTCTTTTGCAAAGCAAAAGAACAAGTTACATGAAAAAGAATTGAAGCTACAGCCAGAAGGGCATAGACATAGTCCAATAAGTTGGGATTCTAGGTTGCAGTCAAGAGAAGATATTGAAGCCACATGGTTGAGAAAGCAAGAGGCCGCTGCCAAAAGAGAACGCATGAAGCAATATTCCTTTTCACAAAGGGAAAGAAAACTTCCCCAAATGAGTGAAGAATCTGTTCACAACAAGGAATATAAAAACGAGAGAATCCGCACTTTAGGCCAATGGCTAAATAAGGAAGCCGATGACTCGAATACACACCACCACAAACAAGATCATCCCTCGAACTTTATTACAAGAGAAGCACATCAAGGACTCAGCCCGCAAATTTCGATTCCCCGGAGATCATTTTCGCATACAAAAAGATGTTCGGTTGGAGCTATTGATATCTCCCTACCGAATTCTCCGGTCCTTCCAACTTACATGGCCGTGACTGAATCCAGCAAAGCGAAGGCGAGATCTATGAGCACGCCACGGCTAAGAACAGGGTATTTGGACACATGCTCCAACAAGAGCGAGTCTCGGAAATAA 1122 0.4581 MMSQIFMAKQNSWFGWVKRLFTSESNNKKPKKWGWGLGRLKGKQQYPKITAPRRALIEASAEQRKHALTVAIATAAAAEAAVAAAHAAAEVVKLTGGSRSYSFLAKGDRSLAAIKIQSAYRAHLARKALRGLKGVTKLQALIRGQAVRRRVSRALKNSATSAVKIPETISQIEERYRKDQIISFAKQKNKLHEKELKLQPEGHRHSPISWDSRLQSREDIEATWLRKQEAAAKRERMKQYSFSQRERKLPQMSEESVHNKEYKNERIRTLGQWLNKEADDSNTHHHKQDHPSNFITREAHQGLSPQISIPRRSFSHTKRCSVGAIDISLPNSPVLPTYMAVTESSKAKARSMSTPRLRTGYLDTCSNKSESRK* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0743 373 MobiDBLite consensus disorder prediction 346 366 - -
Amo03g0743 373 Pfam Protein of unknown function (DUF4005) 317 359 IPR025064 -
Amo03g0743 373 MobiDBLite consensus disorder prediction 235 261 - -
Amo03g0743 373 PANTHER IQ-DOMAIN 12 7 370 - -
Amo03g0743 373 Pfam IQ calmodulin-binding motif 133 150 IPR000048 GO:0005515
Amo03g0743 373 Pfam IQ calmodulin-binding motif 112 130 IPR000048 GO:0005515
Amo03g0743 373 SMART iq_5 108 130 IPR000048 GO:0005515
Amo03g0743 373 SMART iq_5 132 152 IPR000048 GO:0005515
Amo03g0743 373 ProSiteProfiles IQ motif profile. 133 160 IPR000048 GO:0005515
Amo03g0743 373 MobiDBLite consensus disorder prediction 346 373 - -
Amo03g0743 373 ProSiteProfiles IQ motif profile. 109 137 IPR000048 GO:0005515
Amo03g0743 373 Gene3D - 109 162 - -
Amo03g0743 373 PANTHER IQ-DOMAIN 5-RELATED 7 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0743 Amo-Chr3 14356890 14359877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0743 7 364 IQD Protein Family AT5G03960 42.204 7.16e-58 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0743 - - lang:109347509 382.874