Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0724 ATGGATATGGGCGTCGAAAATCTGAAAGAGAAGGAGCAACAAAGTGTAGTGACTGGCTGTAAAGGTGGTGGCTATGAGAGTCGTTCACATGATCGTCTAGTATATGTAACAATATGTCTTATTGGGCACCAGGTGGAAGTTCAGGTGAAAAATGGGTCAATGCACTATGGAATATTTCATGCAACAAACACTGACAATGATTTTGATAATTTGACTTTCTTTCCTGCTTACATCATCATTACTGTTCATCTAGGAATTGTTTTGAAAATGGCTCGCTTAATTAAGGATGCAAGGCTCCTTCTAAGATCTTTAATTGTTTTGAAAAGGATTTTTATGGTATATTCATATGCAGTTTTTGAAACAAATGAGGCCTTGTTTGGTGTAAAAAGCACATTCACAAGAGAAATTGAGGGTGAGGAAACCCAAGATCTGCATCTTGCGGAGGTTGGTGTTGTTTCAACTGTTAGAGGACTTCACTTTCATGAAAACTTTGATATTGATGAAGAAACTAGATTCTCTTCAGTCACTAGGGGTAAAGGTGTTGATGATAGCAGATATGATGAAAATAAGGACATACTATTGAGATGGATTAACTATTTGAGAGCTGATCTCAAAAGAGGAAACATCTCTATTGAAGAGGAAGCCATCATCACTAAGTTGCATGCTTCTTTTGGCAACAAGTTAGTGTTATTTACTACTACTCTATATGTGTCTCAATGGCATTATGTATGTCCATCAGAAGAAAGAACAAAACTTGAAGCTATACACATGGACAAAGACACTGCAATTTGGTTCTTGTAA 801 0.367 MDMGVENLKEKEQQSVVTGCKGGGYESRSHDRLVYVTICLIGHQVEVQVKNGSMHYGIFHATNTDNDFDNLTFFPAYIIITVHLGIVLKMARLIKDARLLLRSLIVLKRIFMVYSYAVFETNEALFGVKSTFTREIEGEETQDLHLAEVGVVSTVRGLHFHENFDIDEETRFSSVTRGKGVDDSRYDENKDILLRWINYLRADLKRGNISIEEEAIITKLHASFGNKLVLFTTTLYVSQWHYVCPSEERTKLEAIHMDKDTAIWFL* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0724 266 Pfam Ataxin 2 SM domain 30 96 IPR025852 -
Amo03g0724 266 PANTHER ATAXIN 2-RELATED 19 98 IPR045117 GO:0003723
Amo03g0724 266 PANTHER ATAXIN 2-RELATED 119 194 IPR045117 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0724 Amo-Chr3 13661816 13663521 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0724 190 235 MYB Transcription Factor Family AT2G47460 56.522 4.58e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0724 - - gmx:100812754 105.145