Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0696 ATGATGGAGCCATGCTTCTTGCTTTCTCTTTTCATCATCATATGCTTCTCTTTTCACCCTTACAATTCCCATGCAGCTTTGATTTCAATCACTGCAAACCAATCTCTCAGTGGTGATCAAACACTTGTCTCCAAAGATGAAAAATTTGAATTGGGTTTCTTCAAATCAGGTAACACCTCTAACTACTACATAGGAATGTGGTACAAAAAAAGAGTCTCACAAAGAACCTATGTTTGGGTAGCAAATAGAGATAACCCAGTTTCTGATAAAAATTCTGCAAAGTTGACAATATCTAAGGGTAATTTAGTACTCTTGGATCAGTCTCAAAATCAAGTTTGGTCAACAAATTTGAATTCTCCAAACTTAGATTCTATAGTAGCTGTGCTTCTAGATAATGGGAATCTTATACTGAGTGATAGGCCTAATCCATCAGAATCAAATTCTCTATGGCAAAGTTTTGATCATCCAACAGATACATTCCTTCCTGGAGCCAAACTTAAGCTTGACAAAAAAACTGGTAAACCTCAGTACCTAACTTCTTGGAAGAACACTCAAGATCCTGGAACAGGATTGTTCTCTTTGGAACTAGACCCTAAAGAAAGCAAAGCTTACTTGATCCTTTGGAACAAAACTGAAGAATATTGGACTAGTGGACCTTGGAATGGTCAAATTTTCAGCGGGGTGCCTGAAATGAGGTTGAATTATATCTACAATTTCTCCTTCCATGATGAACCTGATGAGGCTTACTTCACTTACACGGTATATAACTCTTCGATTCTTTCGCGGTTTGTGATGGATGTCTCTGGGCAGATCAAGCAGCTTTCATGGCTGGACAGTACACAGAATTGGAACTTGTTTTGGTCTGAGCCAAGAACGCAGTGTGAGGTTTACTCGTTCTGTGGCGTGTATGGGAGTTGTACTGAGAACTCTATGCCATTCTGCAGTTGCTTGACTGGTTATGAGCCAGGTAATCCATCTGACTGGTACCTAGAGGATTACTCAAGTGGATGCAAGAGAAGAACAAAGTTCCAATGCGAGACGGCGAATCCTAATGGTGGTGCAAAGGACAGGTTTATGGCATTTCCAAACATGGCATTGCCTTCACCTGCACAACATGTAAGTGCTGGGGATGCAGAGGAATGCGCTTCAACTTGCTTAGAGGACTGTTCTTGCACAGCATATGCATATGGTAATAAAGGTTGTGTAATTTGGAATGGTGACCTCTTGAATTTGCAGCAGCTTTCTCAAGATGATAGTAATGGAGAAACCATGTTTCTCAAGCTTGCAGCATCTGAATTTGATGATCCTAAGAGCAGCAAGAGGAGAACCATTGGTGCTGTTGCAGGTGCTGTTGGTGGCATGGTGATTGTCCTAGCACTTACTCTATTTGCCTTGGTGAGGAGAAGGAGACAAGTTCAATCAGGAACGTTGGTTGAAGGCTCATTGAAGACATTTGGATACAGAGATTTGCAAATTGCTACAATGAATTTCTCGGATAAATTGGGAGGAGGAAGTTTTGGTTCTGTCTTCAAGGGGACACTGCCAGATTCAAGTGTCATAGCAGTGAAGATGCTCGAAAACATTAGCCAAAGTGAGAAACAGTTCCGGACAGAAGTGAGCACAATTGGGATAGTCCAGCATATCAATCTGGTTAGGCTCCGTGGATTCTGTTCCGAAGGTACTAGAAAACTTCTAGTCTATGATTACATGCCAAATGGCTCCTTGGATTCAAACTTGTTTCATGAGAAGGGATTCAAGTCCAAGGTGTTGGAATGGAAAGAAAGGTACCAAATTGCTCTTGGGACAGCTAGAGGACTGGCTTATCTCCATGAGAAGTGTAGAGACTGCATCATACACTGCGATGTGAAGCCGGAAAACATTCTTTTAGATGCTGATTTTTGTCCAAAAGTGGCACATTTTGGCCTTGCAAAGCTGGTCGGAAGGGAAGTTGGCCAGGTCCTAACAACCATGAGAGGAACAAGGGGATACCTCGCGCCAGAATGGAATTCTGGGGTGCCTGTAACTGCCAAAACCGATGTCTATAGCTATGGAATGATGCTGTTCGAGTTTGTGTCCGGTAAGAGGAACTCAGATCCCCCAGAAGATGGACAAGTTAGGTTCTTCCCTGCATGGGCTGCAAAAACAGCGAGCGAAGGCGGCAATGTGCTTAGCCTTTTGGATCCAAAGTTGAAGGGAAATGCTAACATCGAAGAGGTCATTCGAGTCATCAAAATCGCTTCTTGGTGTGTCCAAGACGATGAGACTCATAGGCCATCCATGAGTCAGGTAGTTCACATCCTAGATGGTGTGTTGGATGTGGCTTTTCCTCCTGTGCCAATATTCCTACAAGCCTTTCTTGAGAACCAAGAAACTACGGTTTTCTTCATTGAATCAGGCTCTAATCAGAGTTCACATATGAAAAGCTCCACAACCTCCTCTTAG 2442 0.4275 MMEPCFLLSLFIIICFSFHPYNSHAALISITANQSLSGDQTLVSKDEKFELGFFKSGNTSNYYIGMWYKKRVSQRTYVWVANRDNPVSDKNSAKLTISKGNLVLLDQSQNQVWSTNLNSPNLDSIVAVLLDNGNLILSDRPNPSESNSLWQSFDHPTDTFLPGAKLKLDKKTGKPQYLTSWKNTQDPGTGLFSLELDPKESKAYLILWNKTEEYWTSGPWNGQIFSGVPEMRLNYIYNFSFHDEPDEAYFTYTVYNSSILSRFVMDVSGQIKQLSWLDSTQNWNLFWSEPRTQCEVYSFCGVYGSCTENSMPFCSCLTGYEPGNPSDWYLEDYSSGCKRRTKFQCETANPNGGAKDRFMAFPNMALPSPAQHVSAGDAEECASTCLEDCSCTAYAYGNKGCVIWNGDLLNLQQLSQDDSNGETMFLKLAASEFDDPKSSKRRTIGAVAGAVGGMVIVLALTLFALVRRRRQVQSGTLVEGSLKTFGYRDLQIATMNFSDKLGGGSFGSVFKGTLPDSSVIAVKMLENISQSEKQFRTEVSTIGIVQHINLVRLRGFCSEGTRKLLVYDYMPNGSLDSNLFHEKGFKSKVLEWKERYQIALGTARGLAYLHEKCRDCIIHCDVKPENILLDADFCPKVAHFGLAKLVGREVGQVLTTMRGTRGYLAPEWNSGVPVTAKTDVYSYGMMLFEFVSGKRNSDPPEDGQVRFFPAWAAKTASEGGNVLSLLDPKLKGNANIEEVIRVIKIASWCVQDDETHRPSMSQVVHILDGVLDVAFPPVPIFLQAFLENQETTVFFIESGSNQSSHMKSSTTSS* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0696 813 Gene3D - 24 154 IPR036426 -
Amo03g0696 813 PIRSF SRK 1 813 IPR024171 GO:0004674
Amo03g0696 813 CDD STKc_IRAK 501 769 - -
Amo03g0696 813 ProSiteProfiles Bulb-type lectin domain profile. 27 150 IPR001480 -
Amo03g0696 813 SMART serkin_6 495 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0696 813 Pfam D-mannose binding lectin 76 182 IPR001480 -
Amo03g0696 813 SMART blect_4 33 156 IPR001480 -
Amo03g0696 813 SUPERFAMILY Hairpin loop containing domain-like 354 415 - -
Amo03g0696 813 Gene3D Phosphorylase Kinase; domain 1 461 569 - -
Amo03g0696 813 ProSiteProfiles PAN/Apple domain profile. 345 429 IPR003609 -
Amo03g0696 813 CDD B_lectin 33 156 IPR001480 -
Amo03g0696 813 SMART ntp_6 353 428 IPR003609 -
Amo03g0696 813 Pfam Protein kinase domain 498 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0696 813 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 5 795 - -
Amo03g0696 813 Pfam PAN-like domain 354 410 IPR003609 -
Amo03g0696 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Amo03g0696 813 ProSitePatterns Protein kinases ATP-binding region signature. 501 523 IPR017441 GO:0005524
Amo03g0696 813 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 5 795 - -
Amo03g0696 813 SUPERFAMILY Protein kinase-like (PK-like) 482 802 IPR011009 -
Amo03g0696 813 Gene3D Transferase(Phosphotransferase) domain 1 570 774 - -
Amo03g0696 813 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 221 IPR036426 -
Amo03g0696 813 ProSiteProfiles Protein kinase domain profile. 495 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0696 813 CDD PAN_AP_plant 351 429 - -
Amo03g0696 813 Pfam S-locus glycoprotein domain 215 322 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0696 Amo-Chr3 12865683 12868256 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0696 436 773 Receptor kinase-like Gene Family AT1G56120 43.642 4.39e-69 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Amo03g0696 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0696 - - adu:107477835 1266.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1950 13 29303229 29305953 Amo03g0696 03 12865683 12868256 hybridization
Amo08g1133 08 18889160 18892692 Amo03g0696 03 12865683 12868256 PCT
Amo03g0696 03 12865683 12868256 Amo08g1133 08 18889160 18892692 PCT