Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0688 ACGTTCGGCCACCTTCGCGCACCGTCGCCGACGTTCGCGCACCGTCGCCCACGCTCGCGCACCTATACTAATATAGAAGATAGTGTTATTGTAGAAAATATGAACGCACTTCAAAGAAAGAAGGAAAAAAAACACTTGGGGAATAGTCAAGTGGGTGGTGGTTGGGTAACCACCTCATGGTCCATGATTGCGTCTCACTTACATGGAAGATCAGACAACGAGATAAAGAATCGGTGGCACTCCCAACTTAAGAAGCGATTCCAACACACTTCAGCCTCCAATTCAAATAATCATAATGCCTTAATTCAATCAACGGAAGAAGAGATAGTGAATAATAATCATAATAATAATGCCACTACAAATGAATACCCTTCTAATAATCTTCACAACACTTCTCCAGCTTCTTCTCAAAGCGATACATATGACGATTTTTCTCCATTGAGTGACTTTTTCTACACACCTGCGGTGGATCTTGCTGCACCATTTGGTAATAACTCGGTTTTGGCTATTGATAATGATGATCACTATGCTAATTTCCTGGATAATATGGTACATAGTAACATAGTGCCAATTGGTGCAGATTGTGTTTGGACTCAACAGGATTATTCAAGTCCAATCTATGAGGTACAACTTTGGGGTCTATAG 645 0.4124 TFGHLRAPSPTFAHRRPRSRTYTNIEDSVIVENMNALQRKKEKKHLGNSQVGGGWVTTSWSMIASHLHGRSDNEIKNRWHSQLKKRFQHTSASNSNNHNALIQSTEEEIVNNNHNNNATTNEYPSNNLHNTSPASSQSDTYDDFSPLSDFFYTPAVDLAAPFGNNSVLAIDNDDHYANFLDNMVHSNIVPIGADCVWTQQDYSSPIYEVQLWGL* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0688 214 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 60 198 - -
Amo03g0688 214 SUPERFAMILY Homeodomain-like 57 91 IPR009057 -
Amo03g0688 214 Gene3D - 21 86 - -
Amo03g0688 214 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 87 IPR017930 -
Amo03g0688 214 MobiDBLite consensus disorder prediction 113 140 - -
Amo03g0688 214 SMART sant 18 85 IPR001005 -
Amo03g0688 214 PANTHER MYB-RELATED PROTEIN 60 198 - -
Amo03g0688 214 CDD SANT 60 80 IPR001005 -
Amo03g0688 214 ProSiteProfiles Myb-like domain profile. 14 83 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0688 Amo-Chr3 12748040 12751432 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0688 60 137 MYB Transcription Factor Family AT3G23250 37.647 5.19e-08 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo03g0688 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0688 K09422 - gmx:106799185 68.5514