Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0669 ATGGAGTTTGACCTTGAAAATCCTCTASACAACTCTCATGCTCTTCRTCAATGGGATGCTGTTGCTTCACTATTCCACATTGAATCTCAACACACTCCATCTCACACTTACTTTCACTCTCTCAAAGCTTCAAACTTTAACATCTCTGTTAGAAGGGAACTCATTTCTCTAATCTCCAAGTTTTCTTGCAGTTTGGATCCACTTGTTTCTTACCTTTCTATCAACTATCTGGACCGGTTCTTGTCCAACCATGGGATACTGAAACAAAAGGCATGGGCCCTTAGGCTGCTTGCAATTTCTTGCATTTCTTTAGCATCCAAGATGATAAAGCCAGGGTACTCTGCCATTGATACTCAGGTATATTCTAATTTAATTAACTTTGTTTTGTTCTTGTGA 396 0.3889 MEFDLENPLXNSHALXQWDAVASLFHIESQHTPSHTYFHSLKASNFNISVRRELISLISKFSCSLDPLVSYLSINYLDRFLSNHGILKQKAWALRLLAISCISLASKMIKPGYSAIDTQVYSNLINFVLFL* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0669 131 CDD CYCLIN 51 123 IPR013763 -
Amo03g0669 131 Pfam Cyclin, N-terminal domain 21 111 IPR006671 -
Amo03g0669 131 Gene3D - 34 119 - -
Amo03g0669 131 PANTHER CYCLINS 5 118 IPR039361 -
Amo03g0669 131 SUPERFAMILY Cyclin-like 16 111 IPR036915 -
Amo03g0669 131 Gene3D - 23 33 - -
Amo03g0669 131 PANTHER CYCLIN-D6-1-RELATED 5 118 - -
Amo03g0669 131 SMART cyclin_7 52 130 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0669 Amo-Chr3 12330292 12331020 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0669 1 126 Core Cell Cycle Gene Families AT4G03270 42.537 2.68e-25 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0669 K18812 - gmx:100799951 150.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g1124 08 18769236 18771612 Amo03g0669 03 12330292 12331020 PCT
Amo03g0669 03 12330292 12331020 Amo08g1124 08 18769236 18771612 PCT