Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0663 ATGGATTGCGACTGCACTTGGTCATTTCAATCTCTAGGGCATCGTTGCACCACCGTGGTCTTCTCATTTCACTCAAAAGAAACAAAAAGTCACAAAATACAAAGAGAAGACGAAGAAGCTTCGATCACTGAAAGCATAGAGGAAGTAATCATCGGTGACCGTGCACAGAGTGCGACTGCTCTTTTGCTGGGGGGATTAGGGTTGAATGTTGGTTGGTTTTGGGTTAAGATTTTTGTGCTAGATTTGCGGCTTTTTTTATTTTATACTTTTTTCATTCTCGATGGTATGTTCCCTTGGGATTGGAAGAATGGAAGTCATGGCAAGGTTTCTAGCTGGGAGTTTCTCCCAAACCATTGCAGGTCAGCTGCTGAGTATATTTGCAGAGAACTACGTGAGGCAGATGAAGTAAATTTACTTGATGAAGAAGGAGTGTTTGGAAGTGCAGAAGGAGAAGGCCTTCTGTATTGGCACCACTTGGGGCACATGCTTATGATAGTTGATAATGAAGAATTTTATGAGCATGAGAGGCCACTGTCACTGAAGGATATCAGAAGCCTTATCATTATATTGAGACAAGCTTTATGGCAGCTGCTGTGGGTAAATCATACCACAAATCCTAATTCGTTGAAATCTGCTTCAGCCAATTCAGCTAGTAAGAGGCAGTCTGTTGAAGCTATTCAACAGAGGTCTTATAATCTGTGTTATGGGATCTTTGTTGCTCCTGAAAGCGAAATCCATCTGCAAGATTGGAACAACAGGCGGCAGTTTACATCCCCCGATGATTTTCATGCTGATGGGGTGAATGACATTTTTATCTCCCAGGTTGGGACTCCAATTTGTATTCCTTCTAGAGACTTCATTGACATTGGCCGCATTGCCTCCATTGAAAATAACCACACGCCAGTTGATTATGCAAAGAAAGGGCCGAAAGGAGCTATTAAGTGTTTAGCACCAGCATATTTAAGAGAGATTAGGAAGAAAGGGTTTAAGGGAGTTGAGAATGGGGATAATGCTGTTTTGGATTGTTTTTCACATGAACAAATCACAAAACTTGCATCACATGGGGATAATGGACATAATGGCATTTTTCCTCTGAATCCTAATTCATCCAATCTATATCAGAGGTTTCATGAAAACAGCATTGTCAATTGTATGCTAGAGTTGCAAAATTTAAAAAACAATCTTGTTCTAGGATTATGCAAGAAGCTTCAAGCTGCTGGATGGCCTATAGTTTTGCTATCAAGGGGGAACGGATCAGATAGAAATGTCACTGTTGATAATCTTGGCAAAGCCAGATTCAGAAGTTGTTGGTCTTCCTTGATGATGAGGTCAAATATTTATATTCAGCATAATATATCATATTCATTCACAAATTTGTCCGAGGTTGCAAGCTCACAAGTTTCTGAAGATATTCTTGTCGAGAGAGTAGTAGGGCGGAGATTAGATCCTATTACTGGAAAGATATATCACTTGAAGTATTCTCCTCCAGAGATAGAAGAAATTGCAGCACGGCTTACCCAGCGTTTTGATGATACTGAAGAAAAGGAGTTGCCCTGGTGTGTTCGAAGATGTGGTGAAGCAGCTGGAACAAGCAGAGATTATAGTTGA 1608 0.4067 MDCDCTWSFQSLGHRCTTVVFSFHSKETKSHKIQREDEEASITESIEEVIIGDRAQSATALLLGGLGLNVGWFWVKIFVLDLRLFLFYTFFILDGMFPWDWKNGSHGKVSSWEFLPNHCRSAAEYICRELREADEVNLLDEEGVFGSAEGEGLLYWHHLGHMLMIVDNEEFYEHERPLSLKDIRSLIIILRQALWQLLWVNHTTNPNSLKSASANSASKRQSVEAIQQRSYNLCYGIFVAPESEIHLQDWNNRRQFTSPDDFHADGVNDIFISQVGTPICIPSRDFIDIGRIASIENNHTPVDYAKKGPKGAIKCLAPAYLREIRKKGFKGVENGDNAVLDCFSHEQITKLASHGDNGHNGIFPLNPNSSNLYQRFHENSIVNCMLELQNLKNNLVLGLCKKLQAAGWPIVLLSRGNGSDRNVTVDNLGKARFRSCWSSLMMRSNIYIQHNISYSFTNLSEVASSQVSEDILVERVVGRRLDPITGKIYHLKYSPPEIEEIAARLTQRFDDTEEKELPWCVRRCGEAAGTSRDYS* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0663 535 SUPERFAMILY Microbial and mitochondrial ADK, insert "zinc finger" domain 478 508 IPR036193 GO:0004017
Amo03g0663 535 PANTHER UBIQUITIN-PROTEIN LIGASE E3C 160 274 IPR044611 GO:0000209|GO:0061630
Amo03g0663 535 Gene3D - 444 518 IPR027417 -
Amo03g0663 535 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UPL6 160 274 - -
Amo03g0663 535 Gene3D Translation factors 270 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0663 Amo-Chr3 12212531 12219551 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0663 272 317 Eukaryotic Initiation Factors Gene Family AT1G76810 73.913 2.37e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0663 K10589 - adu:107477912 205.682