Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0646 ATGGGTGTGACATTGACGCTCGCCAGCCCAGTTTGGATGATGATGTATCAGAATTATGGAGATGTCATAGGTCTAACAGCAGAAGATATATGTAAGAAGGTCTTTCGGAGCGAGGAACGTGCTTATGATTTCTTTGCAAAACTTGGAAAACGTCTTGGGTTTGGGGTTCGGAAGGGTGACTATGGGAAAGATGAGGAGGGAAATTTGATAAGGCGAAGATTCTTTTGCAACAAGGCCGGTTTAAGGGACCAGAAGCATTACAATCGGGTGGATAGAAAAAGATCACATCGTCCAGAAACACGCACGAATTGCAAGGCAATGCTGTCAGTATATCTTGATAGGGTATCTTTCACCTGGAAGGTTAGGAAGGTGAACTTGGAACATAATCTCCCTCTGATGCCCAGGATAATGGTACACATGATTCCAGGATTTCGTCATATGTCAAATTCTGCCAAGGCACACATAAATGGGATGCAGCGTTACGGCTTACCAACCTCAAAGATACTTGGGTACATGGCAGGAATTTCTGGGAAGTATTCTTTCCTTGGATTCATAAAAAAAGATGCTTACAAATACATCGAGAAGAGCAAATGCGATAAGATTACAGATGGTGACACTAATGCAGCCGTCATATACCTTGAGGGAAAGGCCACAGCTGATCTGATGTCGATGGCAAGGTACAACCTCACCGATGATGGTATGTTGGCGAACCTGTTCTGGGCTGATGGAGCGAGTCGAGTTGATTACCAATATTTTGGTGATGTCCTTGCGTTTGACTCAACCTAA 786 0.4402 MGVTLTLASPVWMMMYQNYGDVIGLTAEDICKKVFRSEERAYDFFAKLGKRLGFGVRKGDYGKDEEGNLIRRRFFCNKAGLRDQKHYNRVDRKRSHRPETRTNCKAMLSVYLDRVSFTWKVRKVNLEHNLPLMPRIMVHMIPGFRHMSNSAKAHINGMQRYGLPTSKILGYMAGISGKYSFLGFIKKDAYKYIEKSKCDKITDGDTNAAVIYLEGKATADLMSMARYNLTDDGMLANLFWADGASRVDYQYFGDVLAFDST* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0646 261 Pfam FAR1 DNA-binding domain 44 133 IPR004330 -
Amo03g0646 261 PANTHER OS02G0262500 PROTEIN 29 261 - -
Amo03g0646 261 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 29 261 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0646 Amo-Chr3 11983465 11984250 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo03g0646 FAR1 7e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0646 - - ahf:112701370 452.21