Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0627 ATGCTTTCTCTTATTCTCAGATCTGAAATTACTGATGCATCGGTTGTTGCTATTGCTTCTAGCTACACTAATTTAGAATTGCTTGATCTCAGTGGATATGTATCATCTGGCATAAGTGACAGTGGCATAGGAATAATTTGCAATGTGCTCCCTAAAACATTGTCAAGACTCCTTCTTGTCCTTTCCGTTATTGACATAGACACCAGTGGCATCCATGCCCTTGAAAAGTTAGATAAAAGTCTTGAGAAGAGAGATGTTGAAGTAACCAAAGTCTATATTATGGTTGCTATATGA 294 0.3741 MLSLILRSEITDASVVAIASSYTNLELLDLSGYVSSGISDSGIGIICNVLPKTLSRLLLVLSVIDIDTSGIHALEKLDKSLEKRDVEVTKVYIMVAI* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0627 97 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 1 72 - -
Amo03g0627 97 SUPERFAMILY RNI-like 10 69 - -
Amo03g0627 97 Gene3D Ribonuclease Inhibitor 1 93 IPR032675 -
Amo03g0627 97 PANTHER F-BOX/LRR-REPEAT PROTEIN 17-LIKE ISOFORM X1 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0627 Amo-Chr3 11558311 11559120 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0627 50 88 Inorganic Solute Cotransporters AT1G22150 53.846 4.11e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0627 - - jre:108995915 85.1149