Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0616 ATGGGGTGTTGTGTCTCAACTAGTAGTAAGAGTACTTGTAGCAGCCGGAGCAATGGAGAGATGGCGAATCCATCTTGCTTAGAAATCGGATGCTGTGTGCATAAGAAAGCAAGGAGAACCTTCTCTGATCATGTTATTTCACTACACCATTTGGCGTCGTTGCCGAGCAGGATTTTCACTAATGGAAAGAGTAGAGCTTCTTGCATATTTACGCAGCAGGGTCGCAAAGGGATCAATCAGGATGCAATGATTGTGTGGGAAGATTTTATGTCTGAAGATATGACCTTTTGTGGTGTCTTCGATGGCCACGGTCCACATGGTCATCTCGTTGCGCGCAAAGTGAGGGACGCCTTGCCTTTGAAATTGCTCTCATTTCTGCATTCTTCTGAATCGAAGCGAAACGGATCAGGTAAAGCTTGCTTCAAGGGGAATGTAAAACCGGACAATGGAGACTCTCAGAGTCAGAAGGATTTATCAGCCGAGGATAAACTGAATTCAACATGGAGAGAGGCTTTCATGAAGGCATATAAGTCTATGGACAAAGAGCTCAGGTCTCATCCGAATTTGGACTGCTTTTGTAGTGGGAGCACGGCTGTCACTATAGTGAAGCAGGGCTCAAACTTGTTCATGGGATATATCGGGGATTCTCGAGCAGTTATGGGATCCAAGGACAGCAATGACTCCATGGTGGCAATTCAGTTGACCATTGATTTGAAGCCCGATTTGCCAAGAGAAGCAGAAAGAATTAAACGGTGCAAGGGAAGGGTGTTTGCTTTGCAAGATGAGCCTGAGGTGCCAAGGGTATGGTTGCCTTTTGATGAYGCACCGGGATTAGCRATGGCTAGAGCATTYGGAGATTTCTGCTTGAAGGAGTATGGTGTGATTTCCATACCTGAATTTTCTCACCGGCTGCTTACTGACAAAGATCAGTTTGTTGTTCTTGCCTCAGATGGTGTCTGGGATGTTTTAAGCAATGAAGAGGTGGTTGAGATAGTATCTTCGGCACCAACACGGTCATCAGCCGCAAGGATTCTGGTAGATGCTGCAGCCCGGGAGTGGAAACTTAAGTATCCGACTTCAAAGATGGACGACTGTGCCGTGGTCTGCCTATTTTTGGACGGTAAAATGGACACAGAATCCGACTATGACGAACAAGGCTTCTCTTCTGCAACCCTCCAGAGCAATCATTCTGGAAACCCGGTCGAGTCAGACGACGGCCTAAAATCCGAGCCATCTTTGCAGAGGAACTTCACAGTTAGATCCTCAGAAGAAAATGAGCCTAATAATGGAGTACAATCCATTGATGTTGAAGATGGAGCATCATCAGCTGATGATCAAAATTGGTCAGGTTTGGAGGGTGTTACTCGTGTGAACTCATTGGTCCAACTACCTAGATTTTCAGAGGAAAGGCCAAAATCATGA 1422 0.4592 MGCCVSTSSKSTCSSRSNGEMANPSCLEIGCCVHKKARRTFSDHVISLHHLASLPSRIFTNGKSRASCIFTQQGRKGINQDAMIVWEDFMSEDMTFCGVFDGHGPHGHLVARKVRDALPLKLLSFLHSSESKRNGSGKACFKGNVKPDNGDSQSQKDLSAEDKLNSTWREAFMKAYKSMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAVMGSKDSNDSMVAIQLTIDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDKDQFVVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDAAAREWKLKYPTSKMDDCAVVCLFLDGKMDTESDYDEQGFSSATLQSNHSGNPVESDDGLKSEPSLQRNFTVRSSEENEPNNGVQSIDVEDGASSADDQNWSGLEGVTRVNSLVQLPRFSEERPKS* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0616 473 Pfam Protein phosphatase 2C 150 349 IPR001932 -
Amo03g0616 473 SUPERFAMILY PP2C-like 58 374 IPR036457 -
Amo03g0616 473 MobiDBLite consensus disorder prediction 383 402 - -
Amo03g0616 473 MobiDBLite consensus disorder prediction 1 20 - -
Amo03g0616 473 MobiDBLite consensus disorder prediction 130 160 - -
Amo03g0616 473 ProSiteProfiles PPM-type phosphatase domain profile. 66 372 IPR001932 -
Amo03g0616 473 CDD PP2Cc 72 372 IPR001932 -
Amo03g0616 473 PANTHER ALPHABET, ISOFORM E-RELATED 1 461 - -
Amo03g0616 473 MobiDBLite consensus disorder prediction 410 454 - -
Amo03g0616 473 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 461 - -
Amo03g0616 473 MobiDBLite consensus disorder prediction 382 454 - -
Amo03g0616 473 SMART PP2C_4 55 370 IPR001932 -
Amo03g0616 473 Gene3D - 57 380 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0616 Amo-Chr3 11431471 11435238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0616 1 473 PP2C-type Phosphatase Gene Family AT1G03590 67.850 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0616 - - adu:107477895 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1994 13 30307562 30311296 Amo03g0616 03 11431471 11435238 hybridization