Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0588 ATGAATTTGCAATCTAGCTTGTCTTTTATTAATGTAGAATCTCTTTGCACTGATACATTTGGCAGGCTTCTTGTTTGGTCACCGCGGTTAGCTTCTACACATGATGTAGTTTTGCACAACTTTTGTGAGCTTTCTATTGGTTCAGTTTGTCTTGCTGATATTCAGACCAAGGGGCGAGGTCGGTCAAAGAATGTCTGGGAGTCTCCGTTAGGTTGTTTCCTGTTTTTCTTTACTCTACAAATGGAGGATGGGCGAATAGTTCCATTGGTGCAGTATGTGGTTTCCCTTGCTATCACAAAAGCAGGATTACCCTCCATTGACGTCAAAATCAAGTGGCCAAATGATCTTTATTTAAATGGCTTAAAAGTTGGCGGCATTCTGTGCACCTCAACCTATAAATTGAAGAAGTTCAATGTCAGTGCAGGTAGCAAGACATTCTTGCCTCAGAACAAGAGAATTGAAATAGACGTAGCTGAGTATGATACTATTAAGTATTGGAAACAAAGGGCCTTGGGTTTGGAGAAATTGCTTGAGGCAAGCATCCAGAGAGAGCAGATACTCCAAGACAAGTTGCTTGAAAGGATCAATAACATTGAGAGAGCAAATAATTTCTTGCATTTCATCCTCCAGAATGCCCCTGTTGTTATTGGCCATCAGGACAAGGAATTGATACCGGAAAAACAGATGTGGGAATATTCACAGGATCTAGGGTCAAAGAATCTCAAGAGTTCAAGAGAGGTCTTGGAGAAAAGATTACCTGCAAAAAGGGAAATCACTTTTGAGACTGAACTATTCGGATCAAAGACATTCTTGATATATGTAGAACCAGTGTTTAGCAAAGTGCGAAAAAGAGAAATGATGGCCAAGATTCGGGAAGAGATTGCAGTTCAGAAAGCAAAGGAAACAGAACTAAACAAAACCATCCACATTACAGATGAAGAAATCTTATTGTTTTCTCACTCCCTTTTAATAGAGGAGACTATGAGAGCAAAACAAATGCTAGCCACAATGTCTCATGAGATAAGGTCTTCATTATCTGGGGTAGTTAGCATGGCTGAAGTTCTTTCTACCACAAAGCTTGATGGGGAGCAAAGACAGCTCTTAATAATTAGCATGGTTGAAGTTCTTTTCTAA 1134 0.3977 MNLQSSLSFINVESLCTDTFGRLLVWSPRLASTHDVVLHNFCELSIGSVCLADIQTKGRGRSKNVWESPLGCFLFFFTLQMEDGRIVPLVQYVVSLAITKAGLPSIDVKIKWPNDLYLNGLKVGGILCTSTYKLKKFNVSAGSKTFLPQNKRIEIDVAEYDTIKYWKQRALGLEKLLEASIQREQILQDKLLERINNIERANNFLHFILQNAPVVIGHQDKELIPEKQMWEYSQDLGSKNLKSSREVLEKRLPAKREITFETELFGSKTFLIYVEPVFSKVRKREMMAKIREEIAVQKAKETELNKTIHITDEEILLFSHSLLIEETMRAKQMLATMSHEIRSSLSGVVSMAEVLSTTKLDGEQRQLLIISMVEVLF* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0588 377 SUPERFAMILY Class II aaRS and biotin synthetases 14 136 IPR045864 -
Amo03g0588 377 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 243 370 - -
Amo03g0588 377 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 147 223 - -
Amo03g0588 377 Gene3D - 279 374 - -
Amo03g0588 377 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 243 370 - -
Amo03g0588 377 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 147 223 - -
Amo03g0588 377 Coils Coil 181 201 - -
Amo03g0588 377 Pfam Biotin/lipoate A/B protein ligase family 28 142 IPR004143 GO:0036211
Amo03g0588 377 ProSiteProfiles Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. 7 192 IPR004143 GO:0036211
Amo03g0588 377 Gene3D Bira Bifunctional Protein; Domain 2 12 206 IPR045864 -
Amo03g0588 377 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 329 368 IPR036097 GO:0000155|GO:0007165
Amo03g0588 377 CDD HisKA 331 368 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0588 Amo-Chr3 10715979 10718310 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0588 147 370 Histidine Kinase Gene Family AT5G10720 53.309 1.02e-68 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0588 - - adu:107478225 394.43