Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0586 ATGGCGTCTGGATCCTCAGGTCGCGGTAACTCGGGTTCCAAGGGTTTTGATTTCGGTTCCGATGATATCCTCTGCTCCTACGAAGACTTCGGTAACAGGGATTCCAATTCTTCCAATGGCAATCATTCCGATCCAGTTATCAACGCCAATTCAACTAAGGATTTTCACAAATCAAGGATGACGAGAGCATCAATGTTTCCTACTACTGCCTACAATCCGCCTGAAGATTCTCTAAGCCAAGATGTGATTGCAACTGTGGAGAAGAGCATGAAAAAATATGCTGACAACCTCATGCGATTTCTTGAGGGAATTAAAATGAGATCTGATTTAAATCGTGACCATGGGGAGCAAGATTTAAAGCTCAAGGCCCTTGAAAAACATCTTCAAGAGGTTCATAGATCTGTACAAATTTTAAGAGACAAAGCAAGAGCTACAGTTAGCTCTTGCACTTCCTCATCAAATTCCCCCACAGCAGCAGCCGCCGCAACCGGACGCACCCCATGCTCAACAAGCTCCAGTAGCAAATGCGTCCCAAGCCACCCAACAGCCTACTTATTACATGCAGCAACCCCCACTCCATTGCCAAACCCTCCAGCTGCTCCCCAGCTCTCTCAGAATCAGTATTTACCATTGACAAATCAACAATACCAAACACCCCAACTTCAACAAGACATGTCGCGGGTGACTCCACAACCAACACCATCTCAGGTAGCCCCATCCCCAGCTGTGCAACAGTTCCCTCAGTATCAGCAGCCACAGCAACAACAGCAGCAGCCGCAGCAGCCGCAGCCACCCCAGCAGCAGTGGGCTCAGCAGATAAGAACCCCCACATCCTACCCTTCCTATCTACCAAGCCAACCAGCAAACCCAACTCCCCCCACTGAAACACTACCTAACAGCATGCCCATGCAGATGCCAGCATATTCTGGAGTTCCACAACCTGGTTCTAGCCGCGGCGATGCCATGCCTTATGGATACGGAGGAACTGCTGGCCGAACTGTTCCGCAGCAGCAACCTCCACCACAGCAGATGAAGGGCTCTTTCCCAGCACAACCAGGCGACATGTACGGTACTGCCAGCCCCCATCCAGCACTTCCTCCTCCAGCCAGCGCATACACGATGTATGAAGGCGAGGGAGGGAGGACACACCATCCACCCCAACCTCCTCCCCACTATGCTCAAGCTGGATACCCTCCATCAAGTGCTTCACTCCAGAACCCCGGCGGCCACAATCTCATGGGGAGGAATCCTAACCAGACACAGTTTATGCGCAACCACCCTTACAACGAGCTGATTGAGAAAATGGTGAGCATGGGATTCAGGGGTGATCATGTGGCAAGTGTGATCCAGAGGATGGAGGATAGTGGACAGCCAATTGACTTCAACTCTGTGCTTGACAGGTTGAATGTTCATGGCTCTGTGGGCCCCCAGAGAGGAGGATGGTCAGGGTGA 1452 0.5131 MASGSSGRGNSGSKGFDFGSDDILCSYEDFGNRDSNSSNGNHSDPVINANSTKDFHKSRMTRASMFPTTAYNPPEDSLSQDVIATVEKSMKKYADNLMRFLEGIKMRSDLNRDHGEQDLKLKALEKHLQEVHRSVQILRDKARATVSSCTSSSNSPTAAAAATGRTPCSTSSSSKCVPSHPTAYLLHAATPTPLPNPPAAPQLSQNQYLPLTNQQYQTPQLQQDMSRVTPQPTPSQVAPSPAVQQFPQYQQPQQQQQQPQQPQPPQQQWAQQIRTPTSYPSYLPSQPANPTPPTETLPNSMPMQMPAYSGVPQPGSSRGDAMPYGYGGTAGRTVPQQQPPPQQMKGSFPAQPGDMYGTASPHPALPPPASAYTMYEGEGGRTHHPPQPPPHYAQAGYPPSSASLQNPGGHNLMGRNPNQTQFMRNHPYNELIEKMVSMGFRGDHVASVIQRMEDSGQPIDFNSVLDRLNVHGSVGPQRGGWSG* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0586 483 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 141 - -
Amo03g0586 483 MobiDBLite consensus disorder prediction 146 177 - -
Amo03g0586 483 MobiDBLite consensus disorder prediction 283 299 - -
Amo03g0586 483 MobiDBLite consensus disorder prediction 398 421 - -
Amo03g0586 483 MobiDBLite consensus disorder prediction 30 54 - -
Amo03g0586 483 MobiDBLite consensus disorder prediction 218 282 - -
Amo03g0586 483 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 174 481 - -
Amo03g0586 483 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 141 - -
Amo03g0586 483 MobiDBLite consensus disorder prediction 218 421 - -
Amo03g0586 483 MobiDBLite consensus disorder prediction 29 56 - -
Amo03g0586 483 Pfam UBA-like domain (DUF1421) 428 472 IPR010820 -
Amo03g0586 483 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 174 481 - -
Amo03g0586 483 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0586 Amo-Chr3 10691352 10695230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0586 427 468 Trihelix Transcription Factor Family AT5G14540 42.857 5.47e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0586 - - adu:107478128 487.263