Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0570 ATGAGGTCATGGATGTTCAATTTTGATCTTGTTCTGCTCTTTCTCATGTCATTCCAGTTCCATGTATCCATTGAATCTGATAGCATCTTTCCAGGGCAGAGACTTTCAGGAAATCAAACTCTAGTTTCCTATGGACAAATATTTGAAATGGGTTTCTTCTCACCATCAGGTTCAGGTAACAACTCTCGCAATTATTACCTAGGGATATGGTACAAAGGGTTACCAACGCCACAAAGAACAGTGGTGTGGGTAGCCAACAGGGATCATCCTGTATCTGATCCATACTCTTCTTGGTTAGAACTTGACAAGCATGGCAATCTATCTCTCTATACTTCCACCGGTCATGCAGTTTGGTCAACCAACTCTTCCTTTAGTTTGGGTCCCTTGGATTCGATAGCTGCTAATCTTCGGGAAGATGGAAATTTTATTATAAGCAGGTCAGTTGATGACTACAGTTGGCAAAGCTTTGATTACCCAACTGATACCTTGCTGCCTAATGCGTATTTGGAATATGATAATGACAGAGGTATTAAAAGGGTTCTGAAATCTTGGCTAGCTACAAGTAATCCATCAACTGGCAACTTCTCTGCTGAGGTAACTACAGTTTCTGTGGATTTAGCTGAGGTTCAATTGTTGCAAAATGATGGTTTTACTGAGTCTAAATTCTGCATAAATCGGTTTCATGAAACCATAGATTACGTGTATGATTTTGAATTTCACTTTATAGGATATGTGGACATTTACTCGTATGTTTTGTTTTCATATGGCAACTCATACAATCTTGCAAGATATGTGTTAGATGTATCTGGAAAGCTCAAACTTTTAGGGTGGTCAAACGAATGGGTTACCGTCAACATGGACCACAAAAAATGTGACTTTCTCGGTCATAATGAGGATACAGGAGTGAATGGCAAACATAGTGGAAGGAAGAATGCTACTTGGGTGGTTGTGGAGGTGGTGATTGGGCTTACTACTGTGATTGTTGCTATTGCCATTTTGCTGATAAGGCTATGGAAGAGAGGTACCACCACTTCATCTAAGGTAATGGGAGGAGATACATTGAAGCAGTACAACTACAGAGATTTGAGAAAAGCAACTAGAAACTTCACAATTAAGCTTGGAAACGGTGGTTTCAGCACTGTTTACAAAGGGGAATTCCCTGATTCAACTTTCGTAGCTGTCAAGGAACTTCGAGGACACTTTCAAGAAGAAAAACAGCTTCGAGCAGAACTCAATACGGTAGGGCTGATCCAGCACAAAAATCTTGTTTGCTTACTTGGATTCTGCTTACAAGGTTCCCAGAGATTCATAATTTATGATTACATGCCAAATGGTTCTCTAGAATCTCACTTGTTCCAGAGTGATTCTAATGTCTTAGATTGGCGAACTAGATACAATATTATTCTTGGGACTGCCAAAGGTTTAGCTTACTTACACGAGCATTGTAGAGACTGCATCATTCATTGCGACATCAAGCCGGAAAACATTTTGTTGGATGCTGAATTTAATCCTCAAGTCACGGATTTTGGCTTGGCAAAGCTTCTAGGCCGAGACTTCAGCCGGGTTCTTACCACCATGAGAGGAACAAGAGGCTATCTAGCACCAGAGTGGTTCTCTGGTGTCCCAGTCACTGCAAAAGTTGATGTGTATAGCTACGGCCAGGTCCTTCTTGAGATCATTTCAGGTAGAAGGAACATGGATCTAGTAAATGACGATCTAGCTAGTTATTTCCCGTCAATTGTTTTCAATGCATTGAACAATGGGGAGGATGTTCTGCCTTTAGTAGATTCCAAACTACAAGGCAAATTCAGCGCAGAAGAGATAAATAGAGCATGCAAGGTTGGTTGTTGGTGCATTCAAGATGATGAGAATGATAGACCAACAATGAAAGAGGTTGTTCAAGCTTTGGAAGGAAATCTTGATGTAGGTATTCCTCCTATTCCCCAGTTTTTCCTGTCCTTAGCAGAACCTTCTGTCCAAAAAGGTGATCTGAAGGAAAGCAAGGATTATAGTACATCGAGCACACTACCTTCGAGTTTCAGCTTTCAAGCACCAGTTCACCAAGTTCAGGATGAACCTTGA 2082 0.4092 MRSWMFNFDLVLLFLMSFQFHVSIESDSIFPGQRLSGNQTLVSYGQIFEMGFFSPSGSGNNSRNYYLGIWYKGLPTPQRTVVWVANRDHPVSDPYSSWLELDKHGNLSLYTSTGHAVWSTNSSFSLGPLDSIAANLREDGNFIISRSVDDYSWQSFDYPTDTLLPNAYLEYDNDRGIKRVLKSWLATSNPSTGNFSAEVTTVSVDLAEVQLLQNDGFTESKFCINRFHETIDYVYDFEFHFIGYVDIYSYVLFSYGNSYNLARYVLDVSGKLKLLGWSNEWVTVNMDHKKCDFLGHNEDTGVNGKHSGRKNATWVVVEVVIGLTTVIVAIAILLIRLWKRGTTTSSKVMGGDTLKQYNYRDLRKATRNFTIKLGNGGFSTVYKGEFPDSTFVAVKELRGHFQEEKQLRAELNTVGLIQHKNLVCLLGFCLQGSQRFIIYDYMPNGSLESHLFQSDSNVLDWRTRYNIILGTAKGLAYLHEHCRDCIIHCDIKPENILLDAEFNPQVTDFGLAKLLGRDFSRVLTTMRGTRGYLAPEWFSGVPVTAKVDVYSYGQVLLEIISGRRNMDLVNDDLASYFPSIVFNALNNGEDVLPLVDSKLQGKFSAEEINRACKVGCWCIQDDENDRPTMKEVVQALEGNLDVGIPPIPQFFLSLAEPSVQKGDLKESKDYSTSSTLPSSFSFQAPVHQVQDEP* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0570 693 MobiDBLite consensus disorder prediction 669 686 - -
Amo03g0570 693 ProSiteProfiles Bulb-type lectin domain profile. 26 157 IPR001480 -
Amo03g0570 693 Gene3D Phosphorylase Kinase; domain 1 334 441 - -
Amo03g0570 693 Gene3D Transferase(Phosphotransferase) domain 1 442 642 - -
Amo03g0570 693 SMART serkin_6 367 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0570 693 SMART blect_4 32 159 IPR001480 -
Amo03g0570 693 Pfam Protein kinase domain 372 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0570 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Amo03g0570 693 CDD STKc_IRAK 373 638 - -
Amo03g0570 693 CDD B_lectin 35 159 IPR001480 -
Amo03g0570 693 SUPERFAMILY Protein kinase-like (PK-like) 347 636 IPR011009 -
Amo03g0570 693 ProSiteProfiles Protein kinase domain profile. 367 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo03g0570 693 Gene3D - 20 156 IPR036426 -
Amo03g0570 693 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 184 IPR036426 -
Amo03g0570 693 MobiDBLite consensus disorder prediction 663 693 - -
Amo03g0570 693 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 300 657 - -
Amo03g0570 693 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 9 284 - -
Amo03g0570 693 PANTHER KINASE, PUTATIVE-RELATED 300 657 - -
Amo03g0570 693 PANTHER KINASE, PUTATIVE-RELATED 9 284 - -
Amo03g0570 693 Pfam D-mannose binding lectin 80 184 IPR001480 -
Amo03g0570 693 ProSitePatterns Protein kinases ATP-binding region signature. 373 395 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0570 Amo-Chr3 10436987 10440822 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0570 322 676 Receptor kinase-like Gene Family AT4G18250 37.903 1.57e-70 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Amo03g0570 Pkinase 7.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0570 - - ahf:112789804 1195.26