Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0551 ATGCCATTGCCAGCCAAAGTTTTCAGAAACAAGTTTCATGTGATACAATACAACGGTTATCCCCTCGTAATTCTCATTTCCTTAATTATATTAATTATATGTATTAACTTCAATATTCATACTACAACTTTAGTACTAATTCCAGAAGTGTTTCATGTAATTATGACATTTCTTGGTCTTCTCCTTTTACCGTTGCTTCTTAGCTTCTTATCATCTCAAGCATTAGCAAGGAAATTTGATGTTGGTGGCAGAGATGGTTGGGTTGTGAAACCTTATGAAAACTACAATCATTGGGCACAGAGGAATAGATTTCAAGTAAATGACACTCTTCATTTCAAATATATAGAAGGGTCTGATTCAGTGTTGGCAGTGAAAGAGGAGGACTACAATTCTTGCAACACCAATAGTCCCATGGAAAAGATGGATGATGGGGACTCCATTTTTCATTTGAACAATTCAGGTCCATTTTTCTTTATTAGTGGCAACACTCAAAACTGTCAGAATGGCCAAAAGCTTTTCATCATCGTTATGGCTGTTAGACACCATAATCCTTCACCACCCACTCCGGTTGCGCCGTCATCCGAGGCACCGAGCTTGCCACCTCAGCAAATTGACCCATTCAGCTTCAGTTCCCCTGTTCCTTCTCCCTCTAATGAACCATCAAGCTCTACAAGATTTGGTGGTTTTAGTACAAGTGTGGGAGTGGGAGTTTGGGTGATTTTGATATTCACTAGCTTTATAGAGCTAGTTTAG 753 0.3918 MPLPAKVFRNKFHVIQYNGYPLVILISLIILIICINFNIHTTTLVLIPEVFHVIMTFLGLLLLPLLLSFLSSQALARKFDVGGRDGWVVKPYENYNHWAQRNRFQVNDTLHFKYIEGSDSVLAVKEEDYNSCNTNSPMEKMDDGDSIFHLNNSGPFFFISGNTQNCQNGQKLFIIVMAVRHHNPSPPTPVAPSSEAPSLPPQQIDPFSFSSPVPSPSNEPSSSTRFGGFSTSVGVGVWVILIFTSFIELV* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0551 250 CDD OsENODL1_like 77 177 IPR041846 -
Amo03g0551 250 Gene3D - 75 181 IPR008972 -
Amo03g0551 250 SUPERFAMILY Cupredoxins 76 177 IPR008972 -
Amo03g0551 250 MobiDBLite consensus disorder prediction 184 224 - -
Amo03g0551 250 MobiDBLite consensus disorder prediction 197 224 - -
Amo03g0551 250 PANTHER EARLY NODULIN-LIKE PROTEIN 2 61 194 - -
Amo03g0551 250 PANTHER BLUE COPPER PROTEIN 61 194 IPR039391 GO:0009055
Amo03g0551 250 Pfam Plastocyanin-like domain 87 170 IPR003245 GO:0009055
Amo03g0551 250 ProSiteProfiles Phytocyanin domain profile. 77 178 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0551 Amo-Chr3 10134278 10135677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0551 53 246 Phytocyanin Superfamily AT4G28365 44.828 4.82e-53 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0551 - - ahf:112769856 442.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g1260 08 20624423 20625191 Amo03g0551 03 10134278 10135677 PCT
Amo03g0551 03 10134278 10135677 Amo08g1260 08 20624423 20625191 PCT