Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0549 ATGAAGAGAGAACCATCGCAACCACCTCGACGCAAATGCAGCTCCAACGAAATCATGGAGGCAGTGCTGGCTCCGGCAAATGCACGGAATTGCGATGTGGGAAGATCTAACCAGAAGGCAAAATGGTTGTTGAGTCGCATAGAGACAGTTAAGTGTTTCGATGGCGTCGGGCGTAACCGCCATTCCTTTCACATACGTGGTTCACGTCCTTGGTCTGGTTGCCATCACCTCCTCTATGTTTTAGGAATAAGCTTCAGAACAGACAATGAATCTTTCAAGATTCTGGATCCCAAGGGACAGTACTGGATCCCAACCCCATCTCAGATTCTGATTGGTCCTACCCAGTTTTTTTGCCCTCTTTGCTGCAAAACCTTTAACAGATACAACAATATGCAGCAATCCTCCACAGCTATATGGCTTGAAATCTGGGCAGCTATAAAAGCAGCTTGCTCTCAAGCAAAAGTTACACCAACAAAAGTAAGAAGTATAGGATTTGCAACTACTTGTTCTCTGGTTGCAGTGGATGCCGATAGTGCACCTATTTTGGTTTCTTTGACTGATGATTCAAGAAGAAATGTCATAGTATGGATGGATCATAGAGCTTTAAAACAAGCTGAAAGGATCAATTCCTCTAACTCACCTTTATTACAGTATTGCGGTGGAGCTGTTTCACCTGAAATGCAGCCACCAAAAGTACCATCTGAACTAATCCCATTATTTTAG 723 0.4371 MKREPSQPPRRKCSSNEIMEAVLAPANARNCDVGRSNQKAKWLLSRIETVKCFDGVGRNRHSFHIRGSRPWSGCHHLLYVLGISFRTDNESFKILDPKGQYWIPTPSQILIGPTQFFCPLCCKTFNRYNNMQQSSTAIWLEIWAAIKAACSQAKVTPTKVRSIGFATTCSLVAVDADSAPILVSLTDDSRRNVIVWMDHRALKQAERINSSNSPLLQYCGGAVSPEMQPPKVPSELIPLF* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0549 240 PANTHER - 128 232 - -
Amo03g0549 240 PANTHER RIBULOKINASE 128 232 - -
Amo03g0549 240 SUPERFAMILY Actin-like ATPase domain 127 232 IPR043129 -
Amo03g0549 240 Gene3D - 117 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0549 Amo-Chr3 10078881 10082260 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0549 98 163 C2H2 Transcription Factor Family AT3G57670 56.061 2.29e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0549 K00875 - gmx:100802163 158.688