Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0537 ATGAAAAGAGAAACACCAGATGGAGTAGTTGATTGTGGTGCTAACAAGGGTGCTAACAAGGTCGCTGAGAAGGACCCAAACGACGCTTCTAACTGCACAATTGATGGAGTCACAAATGACATTTTGTGTGTTAAAAATTTTAAAAAATTATACTTCACAAATCGGACGTTCCCTCTCTCTCCGTCTCGGATCGAAGTCGCTCTCTCTCGCACCGGCGCCCTTGGGTCGCTCTCCCTCGCGTTTCTCTCTCCCTCACAGCTGCGCAGACCGAAGGCTCTCTCTTTCTCTGCTCTGGCTATTAACAGCTGTAGAAGGCCGTACATTTTCAACCTTCAAGGAGGATCTCTAAACAGTCTTCTGGCCGAAAGTACTTGGTCTGTTTCCACCCCTACCATAGTGGGTGCTCTAGAATTTGAAATAGATCTGTTGTCACCTCACTGTGCGATCACTCACTTAATGTCTGGAACTCCTCTCTCCAGTCACAAGCATCACCTCCCCCCCTTAAAATATGTTTTCATGTCCGATTGGTGGCTTGCCAAGCCTTGCCTTCCACTCCAGGGTTTAGCGGTTGGTGGCATTGCTTATGGCCAGAGAGAGAGAATGTTCTTATCGACAGTGATTGCAAAGAGGCACGAGGCGAATGTCTTGGAGACTGAAGACGGAGTCACTCTTCACTTAAGTAGTTTCATTAACAGCTCTCGCTCGTTTCAGAATGGCTTCCCACGTGAGGTATGTGAAGACTTCTTGTTGGGATTTCCAGACGATTGGCAAAAGTACACTGCTCATAGTTTTAGAGCTAAATGTGTCGATGGGCATACTGGATTTTGTGAGCCAAATGCTTCTTTACACAAGAGGGCTATTGATCCTATCCCATTTTCCATTCGTGATCATCGTTCGGCAGAGAGATATGATTTTTCATCGTCCAATGATGGAATTCTCAAAGCAAAAACGAATATCTGCAATGAACCAGAGAATTCAATTGTCAATGTTTTAAAGCAATCCGTATCAAAAAATAGTGTGGAATGCAGTAATAGCAAGAAAACTGTGGAGGGTGAACGCAATGACAATATTGTGAGTCTTAAATCGTCTCAGTCACTTGTTGACACGATGGATGATGGTGAAAATGGAGTCTTAGTAGCTGCACCGATAAGCCAAGTTGTAAATCCAAACAACGATCAATCTTTGACAGGTGTGTTTGACTGGAATCCATGTAAAGTTCATTCTGGGAAAAGCATGGTTGGATCTCCAGTTTCGACAGCGAAAATCAGAGTAACACAATCATCGGGTGACTGCAAGGAGGAACATGTTAGTCACACTAGAAAATATTCGAAAAAAAATCTCACATCACTCAAAGAAACCAGTTCTTGTCCAGTTAGAAGATCTCCCAGGCTGTCAAAGTCAACGAAATGA 1410 0.439 MKRETPDGVVDCGANKGANKVAEKDPNDASNCTIDGVTNDILCVKNFKKLYFTNRTFPLSPSRIEVALSRTGALGSLSLAFLSPSQLRRPKALSFSALAINSCRRPYIFNLQGGSLNSLLAESTWSVSTPTIVGALEFEIDLLSPHCAITHLMSGTPLSSHKHHLPPLKYVFMSDWWLAKPCLPLQGLAVGGIAYGQRERMFLSTVIAKRHEANVLETEDGVTLHLSSFINSSRSFQNGFPREVCEDFLLGFPDDWQKYTAHSFRAKCVDGHTGFCEPNASLHKRAIDPIPFSIRDHRSAERYDFSSSNDGILKAKTNICNEPENSIVNVLKQSVSKNSVECSNSKKTVEGERNDNIVSLKSSQSLVDTMDDGENGVLVAAPISQVVNPNNDQSLTGVFDWNPCKVHSGKSMVGSPVSTAKIRVTQSSGDCKEEHVSHTRKYSKKNLTSLKETSSCPVRRSPRLSKSTK* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0537 469 PANTHER MIS18-BINDING PROTEIN 1 165 437 IPR039110 -
Amo03g0537 469 PANTHER TRANSCRIPTION REGULATOR OTHERS FAMILY-RELATED 165 437 - -
Amo03g0537 469 MobiDBLite consensus disorder prediction 448 469 - -
Amo03g0537 469 MobiDBLite consensus disorder prediction 427 447 - -
Amo03g0537 469 Pfam SANTA (SANT Associated) 171 259 IPR015216 -
Amo03g0537 469 MobiDBLite consensus disorder prediction 426 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0537 Amo-Chr3 9873905 9878694 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo03g0537 SANTA 6.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0537 - - adu:107478102 600.897