Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0533 ATGAACAACATAAATCACAACCCGATATCAAAATCAACCAATCATGAATCGACGATACCAGACCCGAAAGACGGGCTTCTGAATGAGGAGACACTTTTTGACATGAGCATCTTAGGAGACGAAGCAGAATTTCCGAATATGATGCAAACAGACATAGAGCCTCAAGCTGCTCAGGTACCAAGTCATGTCAGCATTGAATATGTGCTGAAGATGGAGTTCTTCACCCTCGGGGAAGCAAGAGAATTCTACACAAGTTATAAGGGTAAAAATGCCAAAGGAGAGATTGTTAGTTACACTTTTGTTTGCAACAGACAAGGATTTAGGCACAAGAAGTGGTTAGATAAGCTGGATAGGAAAAGAGAGCACAAGCCTATAACGCGATGCGAGTGTGTAGCAGAGATGAGGATAAAGAAGAATCATAGTAATGAAAAATGGTTTGTTTCGCAGTTTATGGATGATCATAACCACACCATACTCTCTAAAAGGTTTATTGCATATCTGCCTTCACACAGGAATATGTCTGATGTAGAAATTGCTCAAAATAATAGCATGAGGAAAGTTGGGATAAGCATTTCAAAGATATACCAGTCATTTGCGATGCAGGTTAGGGGCTTTAACTTAGTAAGATTTACTAAACAAGATATGCACAACGAGGTTCAAAAGCAACACAAGGAGGAGGAGCTTGACTTTCGTTCCTTTTATGGTACCCCGGTGCTTCAAACATAG 726 0.4008 MNNINHNPISKSTNHESTIPDPKDGLLNEETLFDMSILGDEAEFPNMMQTDIEPQAAQVPSHVSIEYVLKMEFFTLGEAREFYTSYKGKNAKGEIVSYTFVCNRQGFRHKKWLDKLDRKREHKPITRCECVAEMRIKKNHSNEKWFVSQFMDDHNHTILSKRFIAYLPSHRNMSDVEIAQNNSMRKVGISISKIYQSFAMQVRGFNLVRFTKQDMHNEVQKQHKEEELDFRSFYGTPVLQT* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0533 241 MobiDBLite consensus disorder prediction 1 16 - -
Amo03g0533 241 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 54 197 - -
Amo03g0533 241 MobiDBLite consensus disorder prediction 1 25 - -
Amo03g0533 241 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 54 197 - -
Amo03g0533 241 Pfam FAR1 DNA-binding domain 89 159 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0533 Amo-Chr3 9821592 9823242 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo03g0533 FAR1 5.1e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0533 - - adu:107478212 380.178